| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220116
Identifier: 183220116
GI number: 183220116
Start: 713911
End: 715167
Strand: Reverse
Name: 183220116
Synonym: LEPBI_I0704
Alternate gene names: NA
Gene position: 715167-713911 (Counterclockwise)
Preceding gene: 183220117
Following gene: 183220112
Centisome position: 19.87
GC content: 35.96
Gene sequence:
>1257_bases ATGAAAAAACAAATCATCATCGTAACTTTAATCGCTTTTTCATTTCCAAGTTTTGCTTGGAACAACCATGCAGGAATCAC CTATCTAATCTTAAAGGACCACTGGAAGGATCAAAAAACTCCAATGGTCAAAGTTGAATCGTTAAAATCATTTTTGACGA AAGAAAAAAACTCCATCCAAGAAACTCTTTCCATTTCTGAAGAATGGGCTTTGGCACGACTTCCTCATCTAACAAAAACC AAAGATGAGTTAAAATTTTCCAATCTCACAAAAGAAAGTGATATTGTGACACAATTTTACAAAGCACTCCGTGTGAATCC CAATCACAAAGCAACTCTCTATGTCCAATCTGTTCCCAAAAAGAATGGAAAACTCCATCCGCTTGGACAACTCACTACTT TAAATGAAAAAGGTAAGTTGGTAAATGAAACCTTTCTTTCTTTGCAAGAAGGACAGATGATTGGCGCAGATGAAGTATTA GTATCAGCTACTGATGAACCTGACTATGATTTGGACCTGCATCTGTTTGAAGATAGTGTCAGTGAGGTTGGAAAAGTATA CGGTTTTGGTTACCAACCTTTTGGAAACCCTGCTGTCGAATATTCATCACAAGCACCATTCCATATGGGATTTTTTTATG AACCAAAAATCATTTTTACATTAGCAGGTTTTTTAAAACGTACCTATCCTGAATTAAGAATCCATCAATTTACCGAATTA TCGAAGTTAGCTTTTTCAAAAGGACATCCTTATTGGGGTTATCGATTTGCTGGATGGGCTCTCCATTATATCCAAGATCT GACTCAACCTTACCATTCATCCGTGTTACCAAGAGTGGGTGCATCGAAACAAATTGGAGTTCAGCTTGTATCGATAGTAG GTTACCAAACTCCGAAGGATAACATGATTCAATTTGTTTCTGGTCGCCATACATTGATCGAAGAATACCAATATTACCTA ATCAAAAATCTAATTATGACTAAAAATTGGAATCACCCAGTTGTAACTTCGATTATGGCATTTGGTGCCAATGATCATGT TGAATGGAAAAGTTTAGATGACCTGCGTGTCAATGTTTGCAAAGAAGCATATGATGCAGGCGAACCTACAGATGAACAAT TGGAAAATTTAAACATTCCAAAGTATGAAACATTGTATGAGGAAAACCATCCAATCCATACAATATTAGCATCTTTACTT AGAAATACATCCAAACATACAAGGGCATATTTGGATGCCTTACCAAAAAAAAATTAG
Upstream 100 bases:
>100_bases GCATAGTTTCGATGTGGAGGATCCAAACCAACATGACTATTACCAAACGGAATATACTTGGAATGGATCATTATTTCAAA AAAAGGAAAAATAGAATCGA
Downstream 100 bases:
>100_bases TCGATAGGTTCGATAGCAAAACGTTCGAGTAGTTCCAATGGAATAATTTCTAACGCTCGTTTGTGGGTTGACTCTAAAAA TACTTTTGGAGCAACCCCAT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MKKQIIIVTLIAFSFPSFAWNNHAGITYLILKDHWKDQKTPMVKVESLKSFLTKEKNSIQETLSISEEWALARLPHLTKT KDELKFSNLTKESDIVTQFYKALRVNPNHKATLYVQSVPKKNGKLHPLGQLTTLNEKGKLVNETFLSLQEGQMIGADEVL VSATDEPDYDLDLHLFEDSVSEVGKVYGFGYQPFGNPAVEYSSQAPFHMGFFYEPKIIFTLAGFLKRTYPELRIHQFTEL SKLAFSKGHPYWGYRFAGWALHYIQDLTQPYHSSVLPRVGASKQIGVQLVSIVGYQTPKDNMIQFVSGRHTLIEEYQYYL IKNLIMTKNWNHPVVTSIMAFGANDHVEWKSLDDLRVNVCKEAYDAGEPTDEQLENLNIPKYETLYEENHPIHTILASLL RNTSKHTRAYLDALPKKN
Sequences:
>Translated_418_residues MKKQIIIVTLIAFSFPSFAWNNHAGITYLILKDHWKDQKTPMVKVESLKSFLTKEKNSIQETLSISEEWALARLPHLTKT KDELKFSNLTKESDIVTQFYKALRVNPNHKATLYVQSVPKKNGKLHPLGQLTTLNEKGKLVNETFLSLQEGQMIGADEVL VSATDEPDYDLDLHLFEDSVSEVGKVYGFGYQPFGNPAVEYSSQAPFHMGFFYEPKIIFTLAGFLKRTYPELRIHQFTEL SKLAFSKGHPYWGYRFAGWALHYIQDLTQPYHSSVLPRVGASKQIGVQLVSIVGYQTPKDNMIQFVSGRHTLIEEYQYYL IKNLIMTKNWNHPVVTSIMAFGANDHVEWKSLDDLRVNVCKEAYDAGEPTDEQLENLNIPKYETLYEENHPIHTILASLL RNTSKHTRAYLDALPKKN >Mature_418_residues MKKQIIIVTLIAFSFPSFAWNNHAGITYLILKDHWKDQKTPMVKVESLKSFLTKEKNSIQETLSISEEWALARLPHLTKT KDELKFSNLTKESDIVTQFYKALRVNPNHKATLYVQSVPKKNGKLHPLGQLTTLNEKGKLVNETFLSLQEGQMIGADEVL VSATDEPDYDLDLHLFEDSVSEVGKVYGFGYQPFGNPAVEYSSQAPFHMGFFYEPKIIFTLAGFLKRTYPELRIHQFTEL SKLAFSKGHPYWGYRFAGWALHYIQDLTQPYHSSVLPRVGASKQIGVQLVSIVGYQTPKDNMIQFVSGRHTLIEEYQYYL IKNLIMTKNWNHPVVTSIMAFGANDHVEWKSLDDLRVNVCKEAYDAGEPTDEQLENLNIPKYETLYEENHPIHTILASLL RNTSKHTRAYLDALPKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47963; Mature: 47963
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQIIIVTLIAFSFPSFAWNNHAGITYLILKDHWKDQKTPMVKVESLKSFLTKEKNSIQ CCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHH ETLSISEEWALARLPHLTKTKDELKFSNLTKESDIVTQFYKALRVNPNHKATLYVQSVPK HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC KNGKLHPLGQLTTLNEKGKLVNETFLSLQEGQMIGADEVLVSATDEPDYDLDLHLFEDSV CCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCEEEEEHHHHH SEVGKVYGFGYQPFGNPAVEYSSQAPFHMGFFYEPKIIFTLAGFLKRTYPELRIHQFTEL HHHHHHHCCCCCCCCCCHHCCCCCCCEEECEEECCHHHHHHHHHHHHCCCHHHHHHHHHH SKLAFSKGHPYWGYRFAGWALHYIQDLTQPYHSSVLPRVGASKQIGVQLVSIVGYQTPKD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH NMIQFVSGRHTLIEEYQYYLIKNLIMTKNWNHPVVTSIMAFGANDHVEWKSLDDLRVNVC HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH KEAYDAGEPTDEQLENLNIPKYETLYEENHPIHTILASLLRNTSKHTRAYLDALPKKN HHHHCCCCCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC >Mature Secondary Structure MKKQIIIVTLIAFSFPSFAWNNHAGITYLILKDHWKDQKTPMVKVESLKSFLTKEKNSIQ CCCCEEEEEEHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHH ETLSISEEWALARLPHLTKTKDELKFSNLTKESDIVTQFYKALRVNPNHKATLYVQSVPK HHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC KNGKLHPLGQLTTLNEKGKLVNETFLSLQEGQMIGADEVLVSATDEPDYDLDLHLFEDSV CCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCEECCCCEEEEECCCCCCCEEEEEHHHHH SEVGKVYGFGYQPFGNPAVEYSSQAPFHMGFFYEPKIIFTLAGFLKRTYPELRIHQFTEL HHHHHHHCCCCCCCCCCHHCCCCCCCEEECEEECCHHHHHHHHHHHHCCCHHHHHHHHHH SKLAFSKGHPYWGYRFAGWALHYIQDLTQPYHSSVLPRVGASKQIGVQLVSIVGYQTPKD HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHH NMIQFVSGRHTLIEEYQYYLIKNLIMTKNWNHPVVTSIMAFGANDHVEWKSLDDLRVNVC HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH KEAYDAGEPTDEQLENLNIPKYETLYEENHPIHTILASLLRNTSKHTRAYLDALPKKN HHHHCCCCCCHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA