Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is coaD
Identifier: 183219513
GI number: 183219513
Start: 86381
End: 86863
Strand: Reverse
Name: coaD
Synonym: LEPBI_I0086
Alternate gene names: 183219513
Gene position: 86863-86381 (Counterclockwise)
Preceding gene: 183219514
Following gene: 183219512
Centisome position: 2.41
GC content: 40.37
Gene sequence:
>483_bases ATGAAAAGTATCGCCGTATACCCTGGTTCCTTTGATCCATTCACCAATGGACATTTAGATATCATACGGCGAGCCCATCC ACTGTTTGAAGAAATCATCATTGCAGTTGCGATCAATTCAAAGAAAACCTCACTTTTCTCTCCTGAAGAACGAGTGGAGA TGATTGGAAAGGTGTTCCACGGATGGGACAAAATCAAAATTGATACGTTTGAAGGCCTTACGGTTGATTACTGTAAGGAA AAAAATTCGCGAGTCATTCTCAGAGGCCTACGTGCTGTGACCGATTTTGATTATGAATATGCAATTTCCTTGATGAACAA AAAATTAGCCCCAGAAATTGAAACTTATTTCTTAATGGCAGACAATGAGTACTCTTTTGTGTCTTCCACTATCGTCAAAG AAGTAGCAAGGCATGGTAGAGCTGTATCCAATCAAGTCCCTGATGTTGTAGGGGAAGCCCTTGTGAAAAAATTCTCCGTT TGA
Upstream 100 bases:
>100_bases ACATTTGAAAAAGAAGAATTGTACAACCAGTACGATGCAGAAGGTTTCATCAATTTGTATGGCCTTCCAATGAAAGAATG GGCAAGGGTAAACCAATAAG
Downstream 100 bases:
>100_bases TCGGACTTTGAGGATCTATGAAAACTCGTTCTACTGTTTTTTACGGTTTTACACTATTATTGTTTGGATCCTTAGGATAT TACTTACTCCAAGCAGGTGG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKSIAVYPGSFDPFTNGHLDIIRRAHPLFEEIIIAVAINSKKTSLFSPEERVEMIGKVFHGWDKIKIDTFEGLTVDYCKE KNSRVILRGLRAVTDFDYEYAISLMNKKLAPEIETYFLMADNEYSFVSSTIVKEVARHGRAVSNQVPDVVGEALVKKFSV
Sequences:
>Translated_160_residues MKSIAVYPGSFDPFTNGHLDIIRRAHPLFEEIIIAVAINSKKTSLFSPEERVEMIGKVFHGWDKIKIDTFEGLTVDYCKE KNSRVILRGLRAVTDFDYEYAISLMNKKLAPEIETYFLMADNEYSFVSSTIVKEVARHGRAVSNQVPDVVGEALVKKFSV >Mature_160_residues MKSIAVYPGSFDPFTNGHLDIIRRAHPLFEEIIIAVAINSKKTSLFSPEERVEMIGKVFHGWDKIKIDTFEGLTVDYCKE KNSRVILRGLRAVTDFDYEYAISLMNKKLAPEIETYFLMADNEYSFVSSTIVKEVARHGRAVSNQVPDVVGEALVKKFSV
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=159, Percent_Identity=41.5094339622642, Blast_Score=149, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_LEPBA (B0S9J5)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001961210.1 - ProteinModelPortal: B0S9J5 - SMR: B0S9J5 - GeneID: 6389151 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_0086 - HOGENOM: HBG288308 - OMA: VRQIAAM - ProtClustDB: PRK00168 - BioCyc: LBIF355278:LBF_0086-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18150; Mature: 18150
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIAVYPGSFDPFTNGHLDIIRRAHPLFEEIIIAVAINSKKTSLFSPEERVEMIGKVFH CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHC GWDKIKIDTFEGLTVDYCKEKNSRVILRGLRAVTDFDYEYAISLMNKKLAPEIETYFLMA CCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE DNEYSFVSSTIVKEVARHGRAVSNQVPDVVGEALVKKFSV CCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKSIAVYPGSFDPFTNGHLDIIRRAHPLFEEIIIAVAINSKKTSLFSPEERVEMIGKVFH CCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHC GWDKIKIDTFEGLTVDYCKEKNSRVILRGLRAVTDFDYEYAISLMNKKLAPEIETYFLMA CCCEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEEE DNEYSFVSSTIVKEVARHGRAVSNQVPDVVGEALVKKFSV CCCHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA