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The map label for this gene is pdtaR [H]

Identifier: 183219508

GI number: 183219508

Start: 81706

End: 82071

Strand: Direct

Name: pdtaR [H]

Synonym: LEPBI_I0081

Alternate gene names: 183219508

Gene position: 81706-82071 (Clockwise)

Preceding gene: 183219506

Following gene: 183219515

Centisome position: 2.27

GC content: 38.25

Gene sequence:

>366_bases
ATGACGAAAAAGAACATCCTCATCGTCGAGGATGAACCATTCCTCGGACTCAATATCAAACAGAAAATTGAATCCTTCGG
TTTTCATGTGATTGCAGTTGTGCCATCCGGGGATGAGGCATTCCAAATTGTTTCTGAAAAGGTACCTGATTTGATCCTTA
TGGATATCAATTTAGAGGGTTCTCTCGATGGGATTGAAACAGCGGAATCTTTACGGGAACAGTTTTCAGTTCCAGTTTTA
TTTTTGACTGGATTTCTCGATGAAACGTCAAAACAACGAATCAATCAAAATTCATCTTATGCCTATCTTATGAAACCATT
TTCAACTGACCAATTGAAAGAAGCGGTCACTGGATTTATGGTTTAA

Upstream 100 bases:

>100_bases
ATAGTATTTTCCTGGTACATTCTCGGGTTGTTTGATACTTTTATCAGCCATATCGTATTTTTACTTTTTAACAGACCCCC
CCTTATAAAATAAAGCATAT

Downstream 100 bases:

>100_bases
CTTTCTGACCTTCTTTCCCATCGAATCAAAAACTCACGATTGCCATCCGCACCTTGGATAGGAGATTCACCTAACCCAAG
GAATTCAAGTTTTGGATCAT

Product: putative response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MTKKNILIVEDEPFLGLNIKQKIESFGFHVIAVVPSGDEAFQIVSEKVPDLILMDINLEGSLDGIETAESLREQFSVPVL
FLTGFLDETSKQRINQNSSYAYLMKPFSTDQLKEAVTGFMV

Sequences:

>Translated_121_residues
MTKKNILIVEDEPFLGLNIKQKIESFGFHVIAVVPSGDEAFQIVSEKVPDLILMDINLEGSLDGIETAESLREQFSVPVL
FLTGFLDETSKQRINQNSSYAYLMKPFSTDQLKEAVTGFMV
>Mature_120_residues
TKKNILIVEDEPFLGLNIKQKIESFGFHVIAVVPSGDEAFQIVSEKVPDLILMDINLEGSLDGIETAESLREQFSVPVLF
LTGFLDETSKQRINQNSSYAYLMKPFSTDQLKEAVTGFMV

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790863, Length=112, Percent_Identity=38.3928571428571, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 13546; Mature: 13415

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKNILIVEDEPFLGLNIKQKIESFGFHVIAVVPSGDEAFQIVSEKVPDLILMDINLEG
CCCCCEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCC
SLDGIETAESLREQFSVPVLFLTGFLDETSKQRINQNSSYAYLMKPFSTDQLKEAVTGFM
CCCCHHHHHHHHHHHCCCCEEEEHHHCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
V
C
>Mature Secondary Structure 
TKKNILIVEDEPFLGLNIKQKIESFGFHVIAVVPSGDEAFQIVSEKVPDLILMDINLEG
CCCCEEEEECCCCCCCCHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCC
SLDGIETAESLREQFSVPVLFLTGFLDETSKQRINQNSSYAYLMKPFSTDQLKEAVTGFM
CCCCHHHHHHHHHHHCCCCEEEEHHHCHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]