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The map label for this gene is yugF [H]

Identifier: 183219506

GI number: 183219506

Start: 80553

End: 81422

Strand: Direct

Name: yugF [H]

Synonym: LEPBI_I0079

Alternate gene names: 183219506

Gene position: 80553-81422 (Clockwise)

Preceding gene: 183219501

Following gene: 183219508

Centisome position: 2.24

GC content: 37.13

Gene sequence:

>870_bases
ATGATTAAACTTTTTTACCGAAGCCTTTATCGAAATTATCAGTCCCAGAGACGTAAATCAATGAAAAATATGGGTGGAAT
TCCCTCTTATGTCAACATGGGAGGACACCGTATTTTTTACTGGAAGTTTGGCAATGGTAACCAAAAACCGATTGTTTTTT
TCCATGGTTTGCTGGATGAAAGTTTCGGTTTTCGCCGGGTCGTGAAAGAATTGTTAAACGACGGCCATCCTCTCTATGTT
TTTGATTTACCTGGTTATGGAAAAAGTAAATTACCTCAAGTGAAATACCTATTCCAAATCGATGTTTGGGCAAACTTACT
TTTAGAATGTATTGAAAAATTGAATTTAAAGAACATTTGTTTGGTAGGTCATTCCATGGGTGGACTTGTCTCCCAACATC
TGGTCCTAGGAGATCAGCACAAACGTGTTGAAAAATTAATCCTCCTTGCCCCGGGAGGGATTCCTCACCCAGAACGAGAA
AAAATGCGTAAGATTTTATTCCCCAAAACAGAATCACAAGTCGTTTTACTTTTACGTTATTTGTATGGGGAAGAATTTCC
TGAACCAGGTTATTTGTTTCGTCATACGCTTGTTACCATTTGGAATGACAAACCAAATGAATATTTGCAAGAGAATACCT
TACGCAGGGAAGATGAGATTTTTTTTGGACCCAAAATGAAAGGTATCAAAATTCCAACTTTAATCCTTGCGGGAGCTGAG
GATGAAATCACTCCTCCGTTTATGATGAACCAAATGAAGTCGTATATTAAAAAAAGTAAAGTGGTTTGGATCCCAAAAAT
TAGACATGCCATCCATTTAGAGAGACCCGATGTAGTCGCAAAGAATATTAGAGAATTCTATTATTCTTAA

Upstream 100 bases:

>100_bases
ACAATACAAAATCTTTTGGGATTTAAGATCGACGAATAGAAAAGTTTTCGAGGAATGGGATAGTAGCTGCGATAACCTGA
GAATTTTTCTTTCTAACATT

Downstream 100 bases:

>100_bases
TTATTCCCCATCGTCGCCAATCGCATCGACGGGACACATTGCCATTGCTGCTTTTGCTTGTTTTTCTTCTGCCTGGTTTT
TAGGCTGATTTTTGAAAAAA

Product: putative proline iminopeptidase

Products: 2-oxopent-4-enoate; succinate [C]

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MIKLFYRSLYRNYQSQRRKSMKNMGGIPSYVNMGGHRIFYWKFGNGNQKPIVFFHGLLDESFGFRRVVKELLNDGHPLYV
FDLPGYGKSKLPQVKYLFQIDVWANLLLECIEKLNLKNICLVGHSMGGLVSQHLVLGDQHKRVEKLILLAPGGIPHPERE
KMRKILFPKTESQVVLLLRYLYGEEFPEPGYLFRHTLVTIWNDKPNEYLQENTLRREDEIFFGPKMKGIKIPTLILAGAE
DEITPPFMMNQMKSYIKKSKVVWIPKIRHAIHLERPDVVAKNIREFYYS

Sequences:

>Translated_289_residues
MIKLFYRSLYRNYQSQRRKSMKNMGGIPSYVNMGGHRIFYWKFGNGNQKPIVFFHGLLDESFGFRRVVKELLNDGHPLYV
FDLPGYGKSKLPQVKYLFQIDVWANLLLECIEKLNLKNICLVGHSMGGLVSQHLVLGDQHKRVEKLILLAPGGIPHPERE
KMRKILFPKTESQVVLLLRYLYGEEFPEPGYLFRHTLVTIWNDKPNEYLQENTLRREDEIFFGPKMKGIKIPTLILAGAE
DEITPPFMMNQMKSYIKKSKVVWIPKIRHAIHLERPDVVAKNIREFYYS
>Mature_289_residues
MIKLFYRSLYRNYQSQRRKSMKNMGGIPSYVNMGGHRIFYWKFGNGNQKPIVFFHGLLDESFGFRRVVKELLNDGHPLYV
FDLPGYGKSKLPQVKYLFQIDVWANLLLECIEKLNLKNICLVGHSMGGLVSQHLVLGDQHKRVEKLILLAPGGIPHPERE
KMRKILFPKTESQVVLLLRYLYGEEFPEPGYLFRHTLVTIWNDKPNEYLQENTLRREDEIFFGPKMKGIKIPTLILAGAE
DEITPPFMMNQMKSYIKKSKVVWIPKIRHAIHLERPDVVAKNIREFYYS

Specific function: 3-hydroxyphenylpropionate degradation. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.7.1.- [C]

Molecular weight: Translated: 33900; Mature: 33900

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLFYRSLYRNYQSQRRKSMKNMGGIPSYVNMGGHRIFYWKFGNGNQKPIVFFHGLLDE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEEHHCC
SFGFRRVVKELLNDGHPLYVFDLPGYGKSKLPQVKYLFQIDVWANLLLECIEKLNLKNIC
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEE
LVGHSMGGLVSQHLVLGDQHKRVEKLILLAPGGIPHPEREKMRKILFPKTESQVVLLLRY
EECCCHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
LYGEEFPEPGYLFRHTLVTIWNDKPNEYLQENTLRREDEIFFGPKMKGIKIPTLILAGAE
HHCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHCCCCCCEEECCCCCCEECCEEEEECCC
DEITPPFMMNQMKSYIKKSKVVWIPKIRHAIHLERPDVVAKNIREFYYS
CCCCCHHHHHHHHHHHHHCCEEEEECHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIKLFYRSLYRNYQSQRRKSMKNMGGIPSYVNMGGHRIFYWKFGNGNQKPIVFFHGLLDE
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCEEEEEEHHCC
SFGFRRVVKELLNDGHPLYVFDLPGYGKSKLPQVKYLFQIDVWANLLLECIEKLNLKNIC
CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEE
LVGHSMGGLVSQHLVLGDQHKRVEKLILLAPGGIPHPEREKMRKILFPKTESQVVLLLRY
EECCCHHHHHHHHHHCCCHHHHHEEEEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHHH
LYGEEFPEPGYLFRHTLVTIWNDKPNEYLQENTLRREDEIFFGPKMKGIKIPTLILAGAE
HHCCCCCCCCHHHEEEEEEEECCCCHHHHHHHHCCCCCCEEECCCCCCEECCEEEEECCC
DEITPPFMMNQMKSYIKKSKVVWIPKIRHAIHLERPDVVAKNIREFYYS
CCCCCHHHHHHHHHHHHHCCEEEEECHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]

Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]