Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183219502

Identifier: 183219502

GI number: 183219502

Start: 75537

End: 76259

Strand: Reverse

Name: 183219502

Synonym: LEPBI_I0075

Alternate gene names: NA

Gene position: 76259-75537 (Counterclockwise)

Preceding gene: 183219503

Following gene: 183219500

Centisome position: 2.12

GC content: 34.85

Gene sequence:

>723_bases
ATGAATGCATTTGTTCTCGCAGCAGGATTTGGCAAACGAATGGGTTCACTTACAGAAAATACCCCGAAACCTCTCTTAAA
AATACAATCCATTGCCTTACTTGATTATGCCTTGTATCTATTACACCTTTGGAATATTGAAAAAATATGGGTCAACACAC
ATTATTTAGGCGAACAAATCAGAAGGCATTTACAAAACTTTAAAAACTTACAAATTGAAGTTTCTTTTGAAAGGAAGGAA
ATTTTAGGAACGGCAGGTGGCATTCGAACTGCATTACCAGATGATTCTGTTTTCGAACCTATCTTACTCATTAATCCTGA
TACCCTTCTCTTTCCGAATCCTCAATTTACACCTAAGTTAGGTTTAGCGAAACATTCGAAAATACATCTCTATCTGTTAC
CAATTCCCGAAGGTGAATCTTATACAAAAATATCCATTGGCAAGGATCAAACTTTGGAATTTGGAAAAGGTAATTATTAT
TATATTGGACTTGCTGTTTTGGATCCAATTTGTCTATCTAGTTTGGAAAAAAATCAGTATTACGATTTGTCAGATATATT
TAAAGACCTTGCCAAACGAGGTGAGATCACCGGAGAAATTTTCCCCGGCGAAGTGTTAGATTTAGGAACAAAAGAACTTT
GGGAAACTTACCAAACAAAAGATGTGTTTGGAAAATCACTCGAACAGATAAAAAGTTTTTTAGCTAAATCCAAGATGGCT
TAG

Upstream 100 bases:

>100_bases
AAATTATCCAATTAGGAATGTTTGCTGATTCACTTTTTATTTTTGTCAGAAGTTTGAGAGATGAACTAAACCACCATAAG
GACTTTCGAAACTTAAATCT

Downstream 100 bases:

>100_bases
GATTTCTTCCTTTCGTTTTTCATATCCTTTTTTACCCAACAGAGCAAACATATTATTTTTATAATCTTCGACACCGGGTT
GGTCAAAAGGATTAACACCT

Product: putative nucleotide-diphospho-sugar transferase

Products: phosphate; GDPmannose

Alternate protein names: Nucleotidyltransferase Family Protein; Nucleotidyl Transferase Family Protein; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Mannose-1-Phosphate Guanylyltransferase; Nucleotidyl Transferase Superfamily; Nucleotidyltransferase; ADP-Glucose Pyrophosphorylase; Aminoglycoside Phosphotransferase; Nucleotidyl Transferase Superfamily Protein; Sugar-Phosphate Nucleotidyl Transferase; Nucleotide-Diphospho-Sugar Transferase

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE
ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY
YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA

Sequences:

>Translated_240_residues
MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE
ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY
YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA
>Mature_240_residues
MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQIRRHLQNFKNLQIEVSFERKE
ILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKLGLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYY
YIGLAVLDPICLSSLEKNQYYDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA

Specific function: Unknown

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.22

Molecular weight: Translated: 27227; Mature: 27227

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQI
CCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
RRHLQNFKNLQIEVSFERKEILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKL
HHHHHHHHCEEEEEEECHHHHHHCCCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCC
GLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYYYIGLAVLDPICLSSLEKNQY
CCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHCCCCC
YDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA
CCHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNAFVLAAGFGKRMGSLTENTPKPLLKIQSIALLDYALYLLHLWNIEKIWVNTHYLGEQI
CCEEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHH
RRHLQNFKNLQIEVSFERKEILGTAGGIRTALPDDSVFEPILLINPDTLLFPNPQFTPKL
HHHHHHHHCEEEEEEECHHHHHHCCCCCCCCCCCCCHHCCEEEECCCEEECCCCCCCCCC
GLAKHSKIHLYLLPIPEGESYTKISIGKDQTLEFGKGNYYYIGLAVLDPICLSSLEKNQY
CCCCCCEEEEEEEECCCCCCEEEEECCCCCCEEECCCCEEEEEHHHHHHHHHHHHCCCCC
YDLSDIFKDLAKRGEITGEIFPGEVLDLGTKELWETYQTKDVFGKSLEQIKSFLAKSKMA
CCHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GDP; alpha-D-mannose 1-phosphate

Specific reaction: GDP + alpha-D-mannose 1-phosphate = phosphate + GDP-mannose

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA