Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183219497

Identifier: 183219497

GI number: 183219497

Start: 70219

End: 71652

Strand: Reverse

Name: 183219497

Synonym: LEPBI_I0070

Alternate gene names: NA

Gene position: 71652-70219 (Counterclockwise)

Preceding gene: 183219499

Following gene: 183219496

Centisome position: 1.99

GC content: 38.77

Gene sequence:

>1434_bases
ATGAAATCCAAAATCGTATCTATCACAAGTTTTACCCTTCTCTTTTTTGTCACAGCCAGCATCACCTCTGATAGTTCCTT
CGATCTATCCACAGATTCCGATCGAAAATCAGTGAGTGTTACCATCTATAACGGAGGCATTGGCCTCGTAAGAGAAACAC
GTGTTCTCAATTTAGCCAAAGGGATCCGCACCTTACGTTTTGAAGATGTCCCTTCACAAATCATTCCTCAAACGGTTCGA
GTGAAAGGAGAAGACCCAAAAAAACTAACAGTGTTTGAACAAAACTACGAATACGATTTGATTTCGCCTGAACGTTTGAT
GGACAAATACATTGGAAAAGAAGTGACCCTTTACCAAGACGGAAAAGAAAAAACTACTTCAGTCAAAGCAAAACTCATCG
CCAATAACGGCAGTCCTGTTTACCAAATAGGAAACGAAGTATCACTGGGATACAATGGACGGGTCACAGTTCCTACAATT
CCTGAAAATTTATTCGCTAAACCAACATTAGTTTGGAAATTAAAAAACGATACGGAAAAAGAACAATCTCTCGAAGTATC
CTATCAAACCAATGGCCTCGGTTGGTCTGCCGATTACATTCTTGTTTTGGATAAAGACGAAAATGAATGTGGACTCAATT
CTTGGGTCACTTTGAATAACAATTCAGGAGCCGAATTTAAAAATGCAGTTTTGCAATTGGTGGCAGGAAAGGTCAATTTA
CTCTCCAACCGCCCCGCTTACTCACCACAACCTCGTTATGCGAAAAAAACCATGGTAAAGGAATATGATGAAGTGTCAGA
AGCTGCACCTGAGTTTAACCAAGAAAATCTTTCCGAGTATTATTTATATACCTTGGACCAACCAACAACCATTGGTTATA
ACCAAACCAAACAAGTGCAACTTTTCCAATCTGAAGGGATCGAAATCAAAAAATACTTTGTATTTGAAAACCTTCCGATG
TACGAAGGAAATGAAAAAAATTTCAACAACGCTACCATTAAATACATTTTTAAAAATGCTAAAAAGAATAACTTAGGCCG
ACCACTTCCGCAAGGCACCATCCGTGTGTTCAAAGCAGATTCCAAAGGCCGTCAACAATTGTTAGGTGAGGACACCATCG
ATCACACTCCAGAGAATGAAGAAGTCAAAATCAAAACGGGCCAAGCGTTTGATGTTGTGGCAAATGGAAAACGACTCGCC
TATGAAGTATTCAAACTCTCACGGGGTGAAAAGTCTTCCTATTCGGTTGAAATACGTAATAGAAAAAAAGAACCGATTGA
AATTCGATTTTATGCAAGTTTATGGGGAGATTGGAACATTACCAAATCATCTCATAAATTCACAAAAGAATCCTCAACCA
AAACATATGCTGATGTTCCACTGAAAGCAAATGAAGTGGTCACTTTAGAATACACGGTTGAAACCAAGTACTAA

Upstream 100 bases:

>100_bases
TTTGCCATATGAATCCTCTTAAAGTGCAGTTTTCCCCTAACGATTTTGGTTGCATTCGTTTTTTAAGTCTCCAGACTGTA
GAATGCTCATGGGAGAGTAC

Downstream 100 bases:

>100_bases
ACATGGAAACAAAGTACGATGCCATCATCATTGGATCGGGAATCGGCGGGCTCACTGCCGCTTCCATTTTGTCACAAGTC
GCTAACAAAAAAGTTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR
VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI
PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL
LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM
YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA
YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY

Sequences:

>Translated_477_residues
MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR
VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI
PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL
LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM
YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA
YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY
>Mature_477_residues
MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAKGIRTLRFEDVPSQIIPQTVR
VKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQDGKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTI
PENLFAKPTLVWKLKNDTEKEQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL
LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQLFQSEGIEIKKYFVFENLPM
YEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKADSKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLA
YEVFKLSRGEKSSYSVEIRNRKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY

Specific function: Unknown

COG id: COG5316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54191; Mature: 54191

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAK
CCCEEEEHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHH
GIRTLRFEDVPSQIIPQTVRVKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQD
HHHEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEC
GKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTIPENLFAKPTLVWKLKNDTEK
CCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEECCCCHHHCCCCEEEEEECCCCCC
EQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEE
LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQ
ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCEEEE
LFQSEGIEIKKYFVFENLPMYEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKAD
EEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
SKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLAYEVFKLSRGEKSSYSVEIRN
CCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHEEEEHHHCCCCCCCEEEEEEC
RKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY
CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKSKIVSITSFTLLFFVTASITSDSSFDLSTDSDRKSVSVTIYNGGIGLVRETRVLNLAK
CCCEEEEHHHHEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEHHHHHHHHH
GIRTLRFEDVPSQIIPQTVRVKGEDPKKLTVFEQNYEYDLISPERLMDKYIGKEVTLYQD
HHHEEEECCCCHHHCCCEEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCEEEEEEC
GKEKTTSVKAKLIANNGSPVYQIGNEVSLGYNGRVTVPTIPENLFAKPTLVWKLKNDTEK
CCCCCCEEEEEEEECCCCEEEEECCEEEECCCCEEEECCCCHHHCCCCEEEEEECCCCCC
EQSLEVSYQTNGLGWSADYILVLDKDENECGLNSWVTLNNNSGAEFKNAVLQLVAGKVNL
CCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEEE
LSNRPAYSPQPRYAKKTMVKEYDEVSEAAPEFNQENLSEYYLYTLDQPTTIGYNQTKQVQ
ECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCCCEEEE
LFQSEGIEIKKYFVFENLPMYEGNEKNFNNATIKYIFKNAKKNNLGRPLPQGTIRVFKAD
EEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECC
SKGRQQLLGEDTIDHTPENEEVKIKTGQAFDVVANGKRLAYEVFKLSRGEKSSYSVEIRN
CCHHHHHCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHEEEEHHHCCCCCCCEEEEEEC
RKKEPIEIRFYASLWGDWNITKSSHKFTKESSTKTYADVPLKANEVVTLEYTVETKY
CCCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCEEEECCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA