Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219488
Identifier: 183219488
GI number: 183219488
Start: 60120
End: 61994
Strand: Reverse
Name: 183219488
Synonym: LEPBI_I0061
Alternate gene names: NA
Gene position: 61994-60120 (Counterclockwise)
Preceding gene: 183219490
Following gene: 183219483
Centisome position: 1.72
GC content: 39.15
Gene sequence:
>1875_bases ATGTTTCAAAAGGGTCAAGACATAATTTGGAAAGGCAGTTTGTGGGTGGTCCTTATCCTCCTTGTGAGTTGTTCCAGTTC CAAACCCTTCCAATTAACAGATGTTTCACCTAAGTATCGTGAATACCAGGGGAGTGATTTAGATCCTCATAAATCAAAAG ATGTTGTCATTCCAGTTACAAAAAATAGGAAGTACGATTCCTTTATTGAAGAGGCACACCGAACCATTGCATTATTAGAA TTTGGTGAAAACATTGCTCTTCGCGCTGATAGCAAAAAAACAGTTGGGGAACCAGTTGAAAAGGAAATGCAAGCGGCTGC TTATTTAGAAGAAGATTTACCCACAGTCATCACTCGCCTTCCTGAGCTCATCCAAATAAACCAAACTCTCATCGATAGCA CTCCGAATGATTTTGATGGCCCATCCATCGGTCGTGTTTCATATGAGTTAGGAAATATATTAGAATCGTTACGCCAATAC AGTCCTAAAGCAATTGGAATCCAAAATGCAATTCGTAATCTAAGATCGGATTCCAATAATTACAGTAAAGGTCGAGACAT TGCAGAACCTGATACCAAACCAGGGTCGGAAGATCCAGTCCTCATCAACACTGATCCAGAACCTCCCAAAAAACCAGAAA AGATTGTAGTTAAAAAAGAAGACCAAACAAATAAAATTTCCATTAAACGATTAAATCGCAAAACAAAAGTTACTGGGAAA GCAACGGAACAAATCAACGAAATGGTAAAAAAGGAAGAGGAAGAAGTCCTCTCCGATGAAGAAAAAAAAGACAAAGAATA CACAGAACAAATCAGAAATGGACTCGTGCAGGTATTCCGTTGGGAATACTATCGTAAGCCAAAAAATTTAGAAAAAATAT TAGCAACACATCCCATTCCAAGAGTCCGTTCCGCAGCAGCATTAGCATTAGGACGTTTGAAAGCAGGTCGGGTTACCTTA CAAACAGCGATCGATAAAGATGGTTACCAAGTAAGGCCGGCGGCATTCAAAGCCCTATCCGATATTGGTGACAAACGATC ACTCTCATACTTTATTGCTGGAACCAAAGCAGAGGACCCAGAAGTAATTGCAGTGAGTTTTGAAGGGCTTGGTAAAACGA AAGACCCCGCAGGAAGAGAACTTATATTAACGCAAGGGATATCATCTGAATATGTTGTGATCGTATCGGGAGCTTTAAGA GGACTCGCGTATCATAAATTAGATGCAGATGTAGAAATTTTTGCCAAATTTTTGAAATCAAACGAACAAGAGATCAAGGA AGCGACCATTGAAGCACTTGCGATCCATGGCAGTCGTGAAAGTTTACGAATTTTGGAACGTGTGGCACAAGAAGAACCTA CACTTACCATGATGGCCATTGACGAAATCAGTAAAAATCCATCGTTATCTGCGACATTTGCCTTAATCCGTTTAAACGAA TCTCTAACCGAAGAAAGATTCACCAAACGGATTGGAGAATCTCTATTACGCAGAAAAGCCTTTGGAAAATATGCCATCAT CCTGATTGAAGATGATTATTTAAGAGCAGAACCAAACGAACGTTCTACCCCAATTTCCTATATAAAAAATAAAGAGATTG GTTTGATATTGTCTGAAACCAAAAAAGAATTTGCAGTGCGAATGGGAGAAAACATCGTCACCGACAAATACATCCAAGTG AAAATGGAATCCACTTTACCTGGAGCAAGGAGTGCATTTGTCACAGGCTGGATATTTTATCCAAAAATTGACATCATTGA AGTAAAATCGCTTGGAAGTGATGGAAACTCGGGGAAATACTCACAGTTAAAAAAAGGGAAACACAAAAACCTATTTAACC CAGACGAAAGGACTAATATTCCTAAAAAGGATTAG
Upstream 100 bases:
>100_bases TTTAACTTTTTTAGCTGGTTTGGCTTGAGACCAGCGAGGTTGCCGCTAATTTTACTTATAGTACGTATCCGATATTCAAA GTATGGAAGTAGGCTATCAT
Downstream 100 bases:
>100_bases TTTTACCTTTGGAAAGGATGGTGGGAACCCATTCCACCGTCCCTTGTTTGAGAGGGACTTTGGGGATCATCCAATGGAGT CCACAAAACCAAGTCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MFQKGQDIIWKGSLWVVLILLVSCSSSKPFQLTDVSPKYREYQGSDLDPHKSKDVVIPVTKNRKYDSFIEEAHRTIALLE FGENIALRADSKKTVGEPVEKEMQAAAYLEEDLPTVITRLPELIQINQTLIDSTPNDFDGPSIGRVSYELGNILESLRQY SPKAIGIQNAIRNLRSDSNNYSKGRDIAEPDTKPGSEDPVLINTDPEPPKKPEKIVVKKEDQTNKISIKRLNRKTKVTGK ATEQINEMVKKEEEEVLSDEEKKDKEYTEQIRNGLVQVFRWEYYRKPKNLEKILATHPIPRVRSAAALALGRLKAGRVTL QTAIDKDGYQVRPAAFKALSDIGDKRSLSYFIAGTKAEDPEVIAVSFEGLGKTKDPAGRELILTQGISSEYVVIVSGALR GLAYHKLDADVEIFAKFLKSNEQEIKEATIEALAIHGSRESLRILERVAQEEPTLTMMAIDEISKNPSLSATFALIRLNE SLTEERFTKRIGESLLRRKAFGKYAIILIEDDYLRAEPNERSTPISYIKNKEIGLILSETKKEFAVRMGENIVTDKYIQV KMESTLPGARSAFVTGWIFYPKIDIIEVKSLGSDGNSGKYSQLKKGKHKNLFNPDERTNIPKKD
Sequences:
>Translated_624_residues MFQKGQDIIWKGSLWVVLILLVSCSSSKPFQLTDVSPKYREYQGSDLDPHKSKDVVIPVTKNRKYDSFIEEAHRTIALLE FGENIALRADSKKTVGEPVEKEMQAAAYLEEDLPTVITRLPELIQINQTLIDSTPNDFDGPSIGRVSYELGNILESLRQY SPKAIGIQNAIRNLRSDSNNYSKGRDIAEPDTKPGSEDPVLINTDPEPPKKPEKIVVKKEDQTNKISIKRLNRKTKVTGK ATEQINEMVKKEEEEVLSDEEKKDKEYTEQIRNGLVQVFRWEYYRKPKNLEKILATHPIPRVRSAAALALGRLKAGRVTL QTAIDKDGYQVRPAAFKALSDIGDKRSLSYFIAGTKAEDPEVIAVSFEGLGKTKDPAGRELILTQGISSEYVVIVSGALR GLAYHKLDADVEIFAKFLKSNEQEIKEATIEALAIHGSRESLRILERVAQEEPTLTMMAIDEISKNPSLSATFALIRLNE SLTEERFTKRIGESLLRRKAFGKYAIILIEDDYLRAEPNERSTPISYIKNKEIGLILSETKKEFAVRMGENIVTDKYIQV KMESTLPGARSAFVTGWIFYPKIDIIEVKSLGSDGNSGKYSQLKKGKHKNLFNPDERTNIPKKD >Mature_624_residues MFQKGQDIIWKGSLWVVLILLVSCSSSKPFQLTDVSPKYREYQGSDLDPHKSKDVVIPVTKNRKYDSFIEEAHRTIALLE FGENIALRADSKKTVGEPVEKEMQAAAYLEEDLPTVITRLPELIQINQTLIDSTPNDFDGPSIGRVSYELGNILESLRQY SPKAIGIQNAIRNLRSDSNNYSKGRDIAEPDTKPGSEDPVLINTDPEPPKKPEKIVVKKEDQTNKISIKRLNRKTKVTGK ATEQINEMVKKEEEEVLSDEEKKDKEYTEQIRNGLVQVFRWEYYRKPKNLEKILATHPIPRVRSAAALALGRLKAGRVTL QTAIDKDGYQVRPAAFKALSDIGDKRSLSYFIAGTKAEDPEVIAVSFEGLGKTKDPAGRELILTQGISSEYVVIVSGALR GLAYHKLDADVEIFAKFLKSNEQEIKEATIEALAIHGSRESLRILERVAQEEPTLTMMAIDEISKNPSLSATFALIRLNE SLTEERFTKRIGESLLRRKAFGKYAIILIEDDYLRAEPNERSTPISYIKNKEIGLILSETKKEFAVRMGENIVTDKYIQV KMESTLPGARSAFVTGWIFYPKIDIIEVKSLGSDGNSGKYSQLKKGKHKNLFNPDERTNIPKKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70304; Mature: 70304
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQKGQDIIWKGSLWVVLILLVSCSSSKPFQLTDVSPKYREYQGSDLDPHKSKDVVIPVT CCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEC KNRKYDSFIEEAHRTIALLEFGENIALRADSKKTVGEPVEKEMQAAAYLEEDLPTVITRL CCCCHHHHHHHHHHEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PELIQINQTLIDSTPNDFDGPSIGRVSYELGNILESLRQYSPKAIGIQNAIRNLRSDSNN HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC YSKGRDIAEPDTKPGSEDPVLINTDPEPPKKPEKIVVKKEDQTNKISIKRLNRKTKVTGK CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHCCHHCCCCH ATEQINEMVKKEEEEVLSDEEKKDKEYTEQIRNGLVQVFRWEYYRKPKNLEKILATHPIP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC RVRSAAALALGRLKAGRVTLQTAIDKDGYQVRPAAFKALSDIGDKRSLSYFIAGTKAEDP HHHHHHHHHHHHCCCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCCC EVIAVSFEGLGKTKDPAGRELILTQGISSEYVVIVSGALRGLAYHKLDADVEIFAKFLKS CEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHC NEQEIKEATIEALAIHGSRESLRILERVAQEEPTLTMMAIDEISKNPSLSATFALIRLNE CHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEECH SLTEERFTKRIGESLLRRKAFGKYAIILIEDDYLRAEPNERSTPISYIKNKEIGLILSET HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCCCCHHHHCCCCEEEEEHHH KKEFAVRMGENIVTDKYIQVKMESTLPGARSAFVTGWIFYPKIDIIEVKSLGSDGNSGKY HHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEECCEEEEEEEECCCCCCCCCH SQLKKGKHKNLFNPDERTNIPKKD HHHHCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MFQKGQDIIWKGSLWVVLILLVSCSSSKPFQLTDVSPKYREYQGSDLDPHKSKDVVIPVT CCCCCCCEEEECHHHHHHHHHHHCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCEEEEEC KNRKYDSFIEEAHRTIALLEFGENIALRADSKKTVGEPVEKEMQAAAYLEEDLPTVITRL CCCCHHHHHHHHHHEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC PELIQINQTLIDSTPNDFDGPSIGRVSYELGNILESLRQYSPKAIGIQNAIRNLRSDSNN HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC YSKGRDIAEPDTKPGSEDPVLINTDPEPPKKPEKIVVKKEDQTNKISIKRLNRKTKVTGK CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHCCHHCCCCH ATEQINEMVKKEEEEVLSDEEKKDKEYTEQIRNGLVQVFRWEYYRKPKNLEKILATHPIP HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCC RVRSAAALALGRLKAGRVTLQTAIDKDGYQVRPAAFKALSDIGDKRSLSYFIAGTKAEDP HHHHHHHHHHHHCCCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCCC EVIAVSFEGLGKTKDPAGRELILTQGISSEYVVIVSGALRGLAYHKLDADVEIFAKFLKS CEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHCCCCHHHHHHHHHC NEQEIKEATIEALAIHGSRESLRILERVAQEEPTLTMMAIDEISKNPSLSATFALIRLNE CHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEECH SLTEERFTKRIGESLLRRKAFGKYAIILIEDDYLRAEPNERSTPISYIKNKEIGLILSET HHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCCCCHHHHCCCCEEEEEHHH KKEFAVRMGENIVTDKYIQVKMESTLPGARSAFVTGWIFYPKIDIIEVKSLGSDGNSGKY HHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHEEEEEEEECCEEEEEEEECCCCCCCCCH SQLKKGKHKNLFNPDERTNIPKKD HHHHCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA