Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183219490
Identifier: 183219490
GI number: 183219490
Start: 63681
End: 64052
Strand: Reverse
Name: 183219490
Synonym: LEPBI_I0063
Alternate gene names: NA
Gene position: 64052-63681 (Counterclockwise)
Preceding gene: 183219491
Following gene: 183219488
Centisome position: 1.78
GC content: 37.37
Gene sequence:
>372_bases ATGGCAAAGTTTGAATTCCCTTCCCTTGTCATTGAAACAACTTCAATCGAGATCAAAGGGGAAGTGGTGCAATTGGTATC GTTTGTAGGCCAAATCACAAATACCAATGCATATGAAATCAACCGTAACATCACATCCGTTTTTGAAGAAGGGATTTATC AAATCATTTTAGATTTAAAGAAATTGGAATACATCAATAGCATTGGTGTGGCGACCCTCATCGGGATTATCAAAACCGTT GAAACCCAAAAGGGAAAAATTAAGATTGGAGGTCTAAATCATTTTTTGGAAAATGTGATCCAACTGATGGACCTTCCAAA AAAAGTGCAGATTTACCATACAAAAGAGGAAGCCATCCTCAACTGGACGTAA
Upstream 100 bases:
>100_bases GAAGGGGAATTCCAAAAATCATTAATGGAAATTGATACCATGACAAATATCATCAAACAAAAGACAGTCGCTATCCGTCT CTTGGAGAACCTTTAGAATT
Downstream 100 bases:
>100_bases CTTCCAATAATTTTTGTTCCTTCTTTTTCCAAATCTCATACTCGATCAAATCTAACAATTTGGAAAGGCCTTCTCTCGTC ACAGCAGACACAAGTAAGGC
Product: putative anti-sigma factor antagonist
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MAKFEFPSLVIETTSIEIKGEVVQLVSFVGQITNTNAYEINRNITSVFEEGIYQIILDLKKLEYINSIGVATLIGIIKTV ETQKGKIKIGGLNHFLENVIQLMDLPKKVQIYHTKEEAILNWT
Sequences:
>Translated_123_residues MAKFEFPSLVIETTSIEIKGEVVQLVSFVGQITNTNAYEINRNITSVFEEGIYQIILDLKKLEYINSIGVATLIGIIKTV ETQKGKIKIGGLNHFLENVIQLMDLPKKVQIYHTKEEAILNWT >Mature_122_residues AKFEFPSLVIETTSIEIKGEVVQLVSFVGQITNTNAYEINRNITSVFEEGIYQIILDLKKLEYINSIGVATLIGIIKTVE TQKGKIKIGGLNHFLENVIQLMDLPKKVQIYHTKEEAILNWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13925; Mature: 13793
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFEFPSLVIETTSIEIKGEVVQLVSFVGQITNTNAYEINRNITSVFEEGIYQIILDLK CCCCCCCEEEEEECEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH KLEYINSIGVATLIGIIKTVETQKGKIKIGGLNHFLENVIQLMDLPKKVQIYHTKEEAIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCEEE NWT CCC >Mature Secondary Structure AKFEFPSLVIETTSIEIKGEVVQLVSFVGQITNTNAYEINRNITSVFEEGIYQIILDLK CCCCCCEEEEEECEEEEHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHH KLEYINSIGVATLIGIIKTVETQKGKIKIGGLNHFLENVIQLMDLPKKVQIYHTKEEAIL HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCEEE NWT CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA