| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is manC [H]
Identifier: 18311290
GI number: 18311290
Start: 2653069
End: 2654139
Strand: Reverse
Name: manC [H]
Synonym: CPE2308
Alternate gene names: 18311290
Gene position: 2654139-2653069 (Counterclockwise)
Preceding gene: 18311291
Following gene: 18311289
Centisome position: 87.55
GC content: 31.75
Gene sequence:
>1071_bases ATGCTTTACTCATTAATTTTAGCAGGAGGAAAGGGTACTAGACTTTATCCACTTTCAAGAAGTTCAAACCCTAAACAATT TCTTAGCATACACAATAATGGGAAGAGTTTTTTAAGTAATACTGTGGATAGAATTAGACCTATAATCCATAAAGATAATA TTTATGTAGTGACAAACCAGGAGTATGAAGACAAAACAAGAGATGAACTTAAAGACATAAGAGAGGAAAATATCTTTACT GAACCTGCTAATAAAGAAACTGCAACCTGTATAGGTCTTTCAGCAGCTAAGCTTTTAAAGAAAGATAAGGATGCAGTTAT GATTGTATTGCCTTCAGACCATTATATAGAAGGAGATAAAAGTTATCTTCAAACTCTGGAACAAGCCGTAGAGATTGCGG ATAAGAAGAGAGCTATTGTTACCATAGGAATAGAGCCAACTAGACCAGAGACAGGTTATGGCTATATAGAAATGGGAGAT AGAGTCAATGGACACATTCCTACCTTCAAGATAGCAAGGTTTACAGAGAAACCTAATTTAGAAGTAGCAAAGGACTTCTT ATTAAAGGGGACTTATTTATGGAATAGTGGAATGTTCATATTTAGAGCTGATGTTATATTGAGAGAAATTGAAAAATATA TTCCTAAGATGTATAAATGTTTAATGGAGATATATCAACACATTGGAGAAGATGATGAGGAAGAAATAATAAAAGAGCAG TATTCTTTAATTGATGGAATATCTATAGATTTTGGAGTAATGCAAAAAACAAGAAGATCCTTTGTTATAAAATGTGATTT TTCTTGGGATGATATAGGTACTTTCTCAGCTCTAAGTAGATTTTTGGGACATAATGGAAATAATAGAACTTCAGATAATG TTTTTTTAGAGGAATGTGAGAATTGTTCCGTTTTTGGAAAGGAAAAATTAATAATAGGATTTGGAATAAAAGATCTAGTA TTAGTTGATGCAGGAGATGTTATTTTGGTCATGGACAAAGGTAGAGACCAAGAGATTAAGCATCTATTAAATTCTATTAG TGGTAAGAAGGAATTTAAAGAATATCTATAA
Upstream 100 bases:
>100_bases TATTTTTGCTTAAACTAAAGCCTTAAATTTTTTTAATACTCACATAATGGGATATTTTCACATAAAATACACTATAACAA TTAACGGAGTTGAAGGCAAC
Downstream 100 bases:
>100_bases GTTTATAAACTTATGTAAAAAAAGTCCTATATCATATACTTTAGGTGTATGATATAGGACTTTTTAGTTACTTTTAATAT CTACAATTTAGTTAAGAAAA
Product: mannose-1-phosphate guanylyltransferase
Products: NA
Alternate protein names: GDP-mannose pyrophosphorylase; GMP; GMPP [H]
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MLYSLILAGGKGTRLYPLSRSSNPKQFLSIHNNGKSFLSNTVDRIRPIIHKDNIYVVTNQEYEDKTRDELKDIREENIFT EPANKETATCIGLSAAKLLKKDKDAVMIVLPSDHYIEGDKSYLQTLEQAVEIADKKRAIVTIGIEPTRPETGYGYIEMGD RVNGHIPTFKIARFTEKPNLEVAKDFLLKGTYLWNSGMFIFRADVILREIEKYIPKMYKCLMEIYQHIGEDDEEEIIKEQ YSLIDGISIDFGVMQKTRRSFVIKCDFSWDDIGTFSALSRFLGHNGNNRTSDNVFLEECENCSVFGKEKLIIGFGIKDLV LVDAGDVILVMDKGRDQEIKHLLNSISGKKEFKEYL
Sequences:
>Translated_356_residues MLYSLILAGGKGTRLYPLSRSSNPKQFLSIHNNGKSFLSNTVDRIRPIIHKDNIYVVTNQEYEDKTRDELKDIREENIFT EPANKETATCIGLSAAKLLKKDKDAVMIVLPSDHYIEGDKSYLQTLEQAVEIADKKRAIVTIGIEPTRPETGYGYIEMGD RVNGHIPTFKIARFTEKPNLEVAKDFLLKGTYLWNSGMFIFRADVILREIEKYIPKMYKCLMEIYQHIGEDDEEEIIKEQ YSLIDGISIDFGVMQKTRRSFVIKCDFSWDDIGTFSALSRFLGHNGNNRTSDNVFLEECENCSVFGKEKLIIGFGIKDLV LVDAGDVILVMDKGRDQEIKHLLNSISGKKEFKEYL >Mature_356_residues MLYSLILAGGKGTRLYPLSRSSNPKQFLSIHNNGKSFLSNTVDRIRPIIHKDNIYVVTNQEYEDKTRDELKDIREENIFT EPANKETATCIGLSAAKLLKKDKDAVMIVLPSDHYIEGDKSYLQTLEQAVEIADKKRAIVTIGIEPTRPETGYGYIEMGD RVNGHIPTFKIARFTEKPNLEVAKDFLLKGTYLWNSGMFIFRADVILREIEKYIPKMYKCLMEIYQHIGEDDEEEIIKEQ YSLIDGISIDFGVMQKTRRSFVIKCDFSWDDIGTFSALSRFLGHNGNNRTSDNVFLEECENCSVFGKEKLIIGFGIKDLV LVDAGDVILVMDKGRDQEIKHLLNSISGKKEFKEYL
Specific function: Involved in GDP-mannose biosynthesis which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. This enzyme participates in synthesis of the LPS O antigen [H]
COG id: COG0836
COG function: function code M; Mannose-1-phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788362, Length=362, Percent_Identity=33.1491712707182, Blast_Score=199, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR018247 - InterPro: IPR006375 - InterPro: IPR001538 - InterPro: IPR005835 - InterPro: IPR014710 [H]
Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]
EC number: =2.7.7.13 [H]
Molecular weight: Translated: 40709; Mature: 40709
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYSLILAGGKGTRLYPLSRSSNPKQFLSIHNNGKSFLSNTVDRIRPIIHKDNIYVVTNQ CCEEEEEECCCCCEEEECCCCCCHHHHEEEECCCHHHHHHHHHHHHHHEECCCEEEEECC EYEDKTRDELKDIREENIFTEPANKETATCIGLSAAKLLKKDKDAVMIVLPSDHYIEGDK CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCEEEEEECCCCEECCCH SYLQTLEQAVEIADKKRAIVTIGIEPTRPETGYGYIEMGDRVNGHIPTFKIARFTEKPNL HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCH EVAKDFLLKGTYLWNSGMFIFRADVILREIEKYIPKMYKCLMEIYQHIGEDDEEEIIKEQ HHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YSLIDGISIDFGVMQKTRRSFVIKCDFSWDDIGTFSALSRFLGHNGNNRTSDNVFLEECE HHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCC NCSVFGKEKLIIGFGIKDLVLVDAGDVILVMDKGRDQEIKHLLNSISGKKEFKEYL CCCEECCCEEEEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure MLYSLILAGGKGTRLYPLSRSSNPKQFLSIHNNGKSFLSNTVDRIRPIIHKDNIYVVTNQ CCEEEEEECCCCCEEEECCCCCCHHHHEEEECCCHHHHHHHHHHHHHHEECCCEEEEECC EYEDKTRDELKDIREENIFTEPANKETATCIGLSAAKLLKKDKDAVMIVLPSDHYIEGDK CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCCEEEEEECCCCEECCCH SYLQTLEQAVEIADKKRAIVTIGIEPTRPETGYGYIEMGDRVNGHIPTFKIARFTEKPNL HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCH EVAKDFLLKGTYLWNSGMFIFRADVILREIEKYIPKMYKCLMEIYQHIGEDDEEEIIKEQ HHHHHHHHCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH YSLIDGISIDFGVMQKTRRSFVIKCDFSWDDIGTFSALSRFLGHNGNNRTSDNVFLEECE HHHHCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCC NCSVFGKEKLIIGFGIKDLVLVDAGDVILVMDKGRDQEIKHLLNSISGKKEFKEYL CCCEECCCEEEEEECCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1383393 [H]