| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311289
Identifier: 18311289
GI number: 18311289
Start: 2652430
End: 2652840
Strand: Reverse
Name: 18311289
Synonym: CPE2307
Alternate gene names: NA
Gene position: 2652840-2652430 (Counterclockwise)
Preceding gene: 18311290
Following gene: 18311288
Centisome position: 87.51
GC content: 25.06
Gene sequence:
>411_bases ATGAGTGATAGAATTGTAGATTTTAATGAGTTAAAAAATAAAGCAAGAGATAAAGATATAGATAAATTTGAGTCATATAT TTATGATTTATATTATTCAGTAGCTCAAGGAAAAATGAGTATGATGGAGCTTTCTAGAGAGATAACTAAATATATGAATG AAAATAATATTTCTCAAGAAAAGTTTTTAAATATTCAAACAGAAATGCTTAAGAGATATGGCTTTGATATGGGTGATATT GAAGGGCAAATGAAAAACTTAGGTATAGATATGAGTAACTTAGGAATTCAAGGTGGAGATTATGAAAATTTAAGAAAAAC TTTGAGTTTTCAAGAGAAGTATAAGGGAAAAGTAAAACATCTACTGTTACTACATATTTTATTAAAAACGAAAAAAATGA TATTGAGTTAA
Upstream 100 bases:
>100_bases TTAAAATATAACTAATTTTAATCCTTAAAATATGTTATAAAGATATTTTTATGTTATTATAGTAATAATATAAGTTTGAA CTTTACGGAGGTATTGTTTT
Downstream 100 bases:
>100_bases TTTTAGAAAATAATAAAGTTCTTATAACTAGTCCTAAAAATATAGATCTTCAGGATAGTGAATTAAATGAGTTCTTATGT TCATACAAAAAAACTCTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSDRIVDFNELKNKARDKDIDKFESYIYDLYYSVAQGKMSMMELSREITKYMNENNISQEKFLNIQTEMLKRYGFDMGDI EGQMKNLGIDMSNLGIQGGDYENLRKTLSFQEKYKGKVKHLLLLHILLKTKKMILS
Sequences:
>Translated_136_residues MSDRIVDFNELKNKARDKDIDKFESYIYDLYYSVAQGKMSMMELSREITKYMNENNISQEKFLNIQTEMLKRYGFDMGDI EGQMKNLGIDMSNLGIQGGDYENLRKTLSFQEKYKGKVKHLLLLHILLKTKKMILS >Mature_135_residues SDRIVDFNELKNKARDKDIDKFESYIYDLYYSVAQGKMSMMELSREITKYMNENNISQEKFLNIQTEMLKRYGFDMGDIE GQMKNLGIDMSNLGIQGGDYENLRKTLSFQEKYKGKVKHLLLLHILLKTKKMILS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16040; Mature: 15909
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRIVDFNELKNKARDKDIDKFESYIYDLYYSVAQGKMSMMELSREITKYMNENNISQE CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH KFLNIQTEMLKRYGFDMGDIEGQMKNLGIDMSNLGIQGGDYENLRKTLSFQEKYKGKVKH HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLLLHILLKTKKMILS HHHHHHHHHHHHHHCC >Mature Secondary Structure SDRIVDFNELKNKARDKDIDKFESYIYDLYYSVAQGKMSMMELSREITKYMNENNISQE CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH KFLNIQTEMLKRYGFDMGDIEGQMKNLGIDMSNLGIQGGDYENLRKTLSFQEKYKGKVKH HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LLLLHILLKTKKMILS HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA