Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311288

Identifier: 18311288

GI number: 18311288

Start: 2651306

End: 2651884

Strand: Reverse

Name: 18311288

Synonym: CPE2306

Alternate gene names: NA

Gene position: 2651884-2651306 (Counterclockwise)

Preceding gene: 18311289

Following gene: 18311287

Centisome position: 87.48

GC content: 26.77

Gene sequence:

>579_bases
ATGTTAATGAACACTCATATTCTTATTGCACAAAATATATTGAGAGATGTTGACGTAGATTTTAAAATAAGTGATAAAAA
CTTTATATATGGAAATGTAAAACCTGATATGGTTTCAAAATATAAATTAAAGAAGCATTATTTAGATGAATCTTTTGATA
TGATAGTGAATAAGATAAAAAAATTAGCATCACTTAGTATGTATGATTTTAAAAAGAAATTTTCAGTTAGTAGATTTAGT
CAGGAGTTAGGAGTTATATGTCACTTTATATGTGATTTTTTCTGTATTCCTCATAGTGAAAGATGGGAATTTAAGCATAG
TATGAATAAACATGTTAAATACGAAAAAGAGTTAGCTAGTTTTGCTAAAACATATACTCCGTCACAGGATGATTTTAAAA
TATGGGGTAATATGTCTGTGAAGTTTTTCTTAGAAGAAGCTCATAAGCTATATAGAAAAAGAGAAAGTTATGAGAATGAT
ATGCAATATGCATACTTTGCATGTAGAAGTATAGTTAAATATATAAGTGATTGCATAGCTAGAAATACAAAGGCAGTCTA
TTCTGAAGCTATAGCTTAA

Upstream 100 bases:

>100_bases
TTAATTAATAAATTTAAGGGGTTTTTGTAATATACTTTTAATTGATATGAAATATCATATTAATAAGAAACTTTTTTAAA
GAGATTAGAGGTAATAAATT

Downstream 100 bases:

>100_bases
TACAAATATTTCCTTTAGATGATAAAATATGTTAAAATCAATTATATATATTGATTAAAGTAATTTTTATAATAGAAAGG
AAATGAGATGGAGAGTAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLMNTHILIAQNILRDVDVDFKISDKNFIYGNVKPDMVSKYKLKKHYLDESFDMIVNKIKKLASLSMYDFKKKFSVSRFS
QELGVICHFICDFFCIPHSERWEFKHSMNKHVKYEKELASFAKTYTPSQDDFKIWGNMSVKFFLEEAHKLYRKRESYEND
MQYAYFACRSIVKYISDCIARNTKAVYSEAIA

Sequences:

>Translated_192_residues
MLMNTHILIAQNILRDVDVDFKISDKNFIYGNVKPDMVSKYKLKKHYLDESFDMIVNKIKKLASLSMYDFKKKFSVSRFS
QELGVICHFICDFFCIPHSERWEFKHSMNKHVKYEKELASFAKTYTPSQDDFKIWGNMSVKFFLEEAHKLYRKRESYEND
MQYAYFACRSIVKYISDCIARNTKAVYSEAIA
>Mature_192_residues
MLMNTHILIAQNILRDVDVDFKISDKNFIYGNVKPDMVSKYKLKKHYLDESFDMIVNKIKKLASLSMYDFKKKFSVSRFS
QELGVICHFICDFFCIPHSERWEFKHSMNKHVKYEKELASFAKTYTPSQDDFKIWGNMSVKFFLEEAHKLYRKRESYEND
MQYAYFACRSIVKYISDCIARNTKAVYSEAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22869; Mature: 22869

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMNTHILIAQNILRDVDVDFKISDKNFIYGNVKPDMVSKYKLKKHYLDESFDMIVNKIK
CCCCCHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
KLASLSMYDFKKKFSVSRFSQELGVICHFICDFFCIPHSERWEFKHSMNKHVKYEKELAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FAKTYTPSQDDFKIWGNMSVKFFLEEAHKLYRKRESYENDMQYAYFACRSIVKYISDCIA
HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNTKAVYSEAIA
CCHHHHHHHHCC
>Mature Secondary Structure
MLMNTHILIAQNILRDVDVDFKISDKNFIYGNVKPDMVSKYKLKKHYLDESFDMIVNKIK
CCCCCHHHHHHHHHHHCCCCEEECCCCEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHH
KLASLSMYDFKKKFSVSRFSQELGVICHFICDFFCIPHSERWEFKHSMNKHVKYEKELAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
FAKTYTPSQDDFKIWGNMSVKFFLEEAHKLYRKRESYENDMQYAYFACRSIVKYISDCIA
HHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNTKAVYSEAIA
CCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA