Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311263

Identifier: 18311263

GI number: 18311263

Start: 2625212

End: 2626429

Strand: Reverse

Name: 18311263

Synonym: CPE2281

Alternate gene names: NA

Gene position: 2626429-2625212 (Counterclockwise)

Preceding gene: 18311264

Following gene: 18311262

Centisome position: 86.64

GC content: 27.09

Gene sequence:

>1218_bases
ATGAAAATTAATAAAAGAGAAAAAACTTTATTATTTGTCCTAGCTCTAGGGGTTGTTGGTTTTGGATATTATAAAGTGGT
TTGGGATTATCAATATAACAAATTAAAAGATTTAAAATCAAAGGAACTAAAAGTAAAAGAAGAATATAACAATGATGTGA
AAATGGTTAATTCTACAGAACCTAATAAAGAAGAAATAAATATTTTTAACTCAGAAATTCAAAACTTAACATTAGGATTT
TATTCAAACATATCACAGCCCAATATAATATTAGAATTAAATAATCTTATGAATGATGCAAATGTTAAAGGAACTATGAG
TTTTTCTGAAATAAAAACTATGCCAGTTATGGACAAGCAACAGGGAGATTCCTCTAGTAAAAGTGAGGATGATGAAAATC
CAAATCAAATACAGGGAATAGTTAATGATTATAATAATATAATTGATAAGAAGAAAAATGAAGATAACAAAGATAAAAAG
CAAGAAGAAATATATAACTTAAGCCAAATGACAGTTTCATTAAGTGTAAATGGTACTTATGATAATGTTATGAAATTTAT
GAAGTCTATTGAAGAGAATCCAAAGCACATAAATATACTTAATTTTAATTTAAGTGCACAAACTGATGGAAATGTATCAG
CAAATATGAATATACAACTTGTTGCAATTCCAAAGATAGATGCTTCAAAAGAAGAGTTTACAACAGCTGATGAGAAGTAT
GGTAAGGAAAATCCCTTTTCAGGAGCAAGTGCAGTTGGAACAGGAACAATAGAAAATGAATTAGAAAATTCAAAGGTTAA
GAATGATTTCTTAATGACTGTTAGACCTATAAATTCAGATTTACCAACAATAGTTTTAGGTAAAGCTGATGATAAGGATA
AAAAAACATATTTAAATAATGATGAAAATTCAGTAAGTAATATTGAGATGTACATTTCAGGTGATAATGGAAAGTACTAT
TACAAATACAAGGTTGAAGGAAGAAGTTACCCAACAAAATTTGAAGGTAATGGAGAAGAATTCAAACCAAATGGAAATGA
TATAAACTTTGAAATATTCTCAGAGAAGAGAGTAAATAAAGATGATAAATCTGGAGCTAACATAAAAATTGTGAATAGTT
CAGATAAAGAAGTTAATTTGATAATAAATAAGGATGACGAAAAAAGTCCAAGAGTTAATGTAACCACAGATGGCAAGGTT
AAAGTGATTAAAAACTAA

Upstream 100 bases:

>100_bases
GGTTTTATAGAAAATACATATATAAGTGGAATTGGAGAAAGAAATGCACAGGGAGACTATTCATTCTCCATAAATTGTAC
TTTAAAGGAGGTAGGAAATA

Downstream 100 bases:

>100_bases
TAGAAAAGGTGTGTGAAGCTATGGGTATCAAAAAAAGAAAAAGTAAAAAAGGGTTTACAGTAATAGAAGCTATAATTAGT
TTAGTTTTGTTTACTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MKINKREKTLLFVLALGVVGFGYYKVVWDYQYNKLKDLKSKELKVKEEYNNDVKMVNSTEPNKEEINIFNSEIQNLTLGF
YSNISQPNIILELNNLMNDANVKGTMSFSEIKTMPVMDKQQGDSSSKSEDDENPNQIQGIVNDYNNIIDKKKNEDNKDKK
QEEIYNLSQMTVSLSVNGTYDNVMKFMKSIEENPKHINILNFNLSAQTDGNVSANMNIQLVAIPKIDASKEEFTTADEKY
GKENPFSGASAVGTGTIENELENSKVKNDFLMTVRPINSDLPTIVLGKADDKDKKTYLNNDENSVSNIEMYISGDNGKYY
YKYKVEGRSYPTKFEGNGEEFKPNGNDINFEIFSEKRVNKDDKSGANIKIVNSSDKEVNLIINKDDEKSPRVNVTTDGKV
KVIKN

Sequences:

>Translated_405_residues
MKINKREKTLLFVLALGVVGFGYYKVVWDYQYNKLKDLKSKELKVKEEYNNDVKMVNSTEPNKEEINIFNSEIQNLTLGF
YSNISQPNIILELNNLMNDANVKGTMSFSEIKTMPVMDKQQGDSSSKSEDDENPNQIQGIVNDYNNIIDKKKNEDNKDKK
QEEIYNLSQMTVSLSVNGTYDNVMKFMKSIEENPKHINILNFNLSAQTDGNVSANMNIQLVAIPKIDASKEEFTTADEKY
GKENPFSGASAVGTGTIENELENSKVKNDFLMTVRPINSDLPTIVLGKADDKDKKTYLNNDENSVSNIEMYISGDNGKYY
YKYKVEGRSYPTKFEGNGEEFKPNGNDINFEIFSEKRVNKDDKSGANIKIVNSSDKEVNLIINKDDEKSPRVNVTTDGKV
KVIKN
>Mature_405_residues
MKINKREKTLLFVLALGVVGFGYYKVVWDYQYNKLKDLKSKELKVKEEYNNDVKMVNSTEPNKEEINIFNSEIQNLTLGF
YSNISQPNIILELNNLMNDANVKGTMSFSEIKTMPVMDKQQGDSSSKSEDDENPNQIQGIVNDYNNIIDKKKNEDNKDKK
QEEIYNLSQMTVSLSVNGTYDNVMKFMKSIEENPKHINILNFNLSAQTDGNVSANMNIQLVAIPKIDASKEEFTTADEKY
GKENPFSGASAVGTGTIENELENSKVKNDFLMTVRPINSDLPTIVLGKADDKDKKTYLNNDENSVSNIEMYISGDNGKYY
YKYKVEGRSYPTKFEGNGEEFKPNGNDINFEIFSEKRVNKDDKSGANIKIVNSSDKEVNLIINKDDEKSPRVNVTTDGKV
KVIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45947; Mature: 45947

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKREKTLLFVLALGVVGFGYYKVVWDYQYNKLKDLKSKELKVKEEYNNDVKMVNSTE
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHCCCHHCEEEHHHCCCCEEEEECCC
PNKEEINIFNSEIQNLTLGFYSNISQPNIILELNNLMNDANVKGTMSFSEIKTMPVMDKQ
CCHHHEEEEHHHHCEEEEEHHCCCCCCEEEEEEHHHCCCCCCEEEEEHHHHCCCCCCCCC
QGDSSSKSEDDENPNQIQGIVNDYNNIIDKKKNEDNKDKKQEEIYNLSQMTVSLSVNGTY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEEEEEEECCCH
DNVMKFMKSIEENPKHINILNFNLSAQTDGNVSANMNIQLVAIPKIDASKEEFTTADEKY
HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCHHHHCCCHHHC
GKENPFSGASAVGTGTIENELENSKVKNDFLMTVRPINSDLPTIVLGKADDKDKKTYLNN
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHCCCC
DENSVSNIEMYISGDNGKYYYKYKVEGRSYPTKFEGNGEEFKPNGNDINFEIFSEKRVNK
CCCCCEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCC
DDKSGANIKIVNSSDKEVNLIINKDDEKSPRVNVTTDGKVKVIKN
CCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCEEEEEEC
>Mature Secondary Structure
MKINKREKTLLFVLALGVVGFGYYKVVWDYQYNKLKDLKSKELKVKEEYNNDVKMVNSTE
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHCCCHHCEEEHHHCCCCEEEEECCC
PNKEEINIFNSEIQNLTLGFYSNISQPNIILELNNLMNDANVKGTMSFSEIKTMPVMDKQ
CCHHHEEEEHHHHCEEEEEHHCCCCCCEEEEEEHHHCCCCCCEEEEEHHHHCCCCCCCCC
QGDSSSKSEDDENPNQIQGIVNDYNNIIDKKKNEDNKDKKQEEIYNLSQMTVSLSVNGTY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCEEEEEEEEEECCCH
DNVMKFMKSIEENPKHINILNFNLSAQTDGNVSANMNIQLVAIPKIDASKEEFTTADEKY
HHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCEEEEEEECCCCCCHHHHCCCHHHC
GKENPFSGASAVGTGTIENELENSKVKNDFLMTVRPINSDLPTIVLGKADDKDKKTYLNN
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCHHCCCC
DENSVSNIEMYISGDNGKYYYKYKVEGRSYPTKFEGNGEEFKPNGNDINFEIFSEKRVNK
CCCCCEEEEEEEECCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCC
DDKSGANIKIVNSSDKEVNLIINKDDEKSPRVNVTTDGKVKVIKN
CCCCCCEEEEEECCCCEEEEEEECCCCCCCEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA