Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18311261
Identifier: 18311261
GI number: 18311261
Start: 2622077
End: 2624185
Strand: Reverse
Name: 18311261
Synonym: CPE2279
Alternate gene names: NA
Gene position: 2624185-2622077 (Counterclockwise)
Preceding gene: 18311262
Following gene: 18311260
Centisome position: 86.57
GC content: 25.04
Gene sequence:
>2109_bases ATGTTATACATGAAGAAGAAAAAAGGAGCTTCTCTTGCATATGTAATAGTAGTCTTGGCAATAATTGCAACAATAGGTAC AGCTATAGTTTCACTTTCTTTAGCAAATTATAAAGCTATAATAGTTGATTCTAAAAAAACTCAAAATTTATATATGTCAG AATCAGGGTTAGATGAGGCTAAAGTCAAAATTAATAATTTGACTTCAAAGGCTGTAGAAGCGGGAAATGATGCGGTAACT AAAAGTAGTATTGAAAATTTAACTTCTGAAAATATAGAAAGTACTCAAAATGAGATTTTTAAAAAGGAATATAAAAAATA CATACAGAATAATCTTAAAAGTTTATTTAAAATTAAAGATGGACATGTCTTGTTTAATACAAAAGGATTTAAATATGAAA AAGAAGATAATTATTATGATATAGAATTAGTTTCTATAAATAATAATAAATTAGAGTTAGTTAATAAAATAAACCAATTA GGTGATTTGGATAAAAACTTTATTTTTGAATTATCAGGAAATAAAAAAAGTGATAAGGAGATTCTAACTCTAAGATTAAA TTCAAAATTTAATGTTAAAGATGGAAATGAAATTAAAAACTATAAGGATGTATCATTAACTTTTGAGATAGAAGTGCCAG ATTATAATGGAGCATATTATACAGAAAAGATACCAGTATATAATATATGGCAACAAGGTTTAGTGGTAGGTGAAAATCTT AATATTAATCAAAATAGCAATTTAAATATAAATGGAAGTGCTTATGTTTCGGCAAATTATAGTTTTGAAGATAATAAGTC ATATAAAAATTCAAGTCAAAACAAAAATGCAAGTGGAATAGTTATTTCTGGTGGTGATTTAAGTGTAGATAACGGAATTT TAGTTAGTAAGCAAGACATAATTCTTAATGGAGAGAATGGAGAACTTAAAGTTTTATCTTCATTAGGTGGAAATAATGGG GGAGTGTATACACATAATCTTGGTATATATTCTTTTGAAAATCTCAATTCTAATAAAGTTTTTGGTAATAGTGAAACTTT AGAGGGAAATAAGATTGACACTAAGGTTCCTGTTTATACTATGAATGATTTAATAATGAATGGATTAAACTCAACAATAA AACTTCAAGATGGTTTTTATGGAATAAACAGTAACTCTGGTGATAAAACTTTAACTGGAGAAAAACAAAATTCAAGTGCT ATAATAATAAATTCAAAAGATTTAGGCAATGGATCAAGTTTAGATATCAAGAATAAAGCTGTAATAATGGGAAGTGCATA TATAAATACTTTAGGTGAAAGTTACCAAACAGGGGAGTCTTTAGCTGTAAAGGGAAATTATGTAGCTTATACATATGCGG TTAAAGGTAAAGATGTTGAGTTTAAATATTATAATCCGCTACAGTTAGTTGAGAGAATAAATGGAGATAGCAGTTTAGAC GCTAAAGCTAAATACTTTAAGGAAGCTAGTAAGAATTTTAATATAAAAAGTAATGGAATAAAATTACCTAGTTCTGATGA TGTAATAAGTGTTGGGGTAACTGTAGATGGTAATAATGATATAAAAGGAAACAACTTAATTTTAGATGATATTAAAAAAA TAAGAGAAGAGTATGTAGATAATTATTTTAGAAAAGTAAATGTAGTAAATACAGAAACAACAATTTCTAGAGAAAAGAAA TATACAAATAAAATTACAAAGGATAATGATTTAATATATATTGATATAAATAATGGAGCTAATGTTCTAAAAAATATAGA GAATAGTCCGTTGAAAATAAAAGATAAATTAATAACAATAAATAAAAGTTGTAATGGGATTATTATAACAGATAAAGATA TAAAAATAGATAGTAGTATAGATTTTAAGGGAACTATAATAACTACTGGGAATTTAGATGTTTTAAATAAGGATACGGCT AAAAAACAAAATATAAGTATAACTTATGATGAAGAATATTTAAAACAATTAATAGGAAGTAATTATGAAGATTTTAAAGG AGTATTTACTGGAAATCCAGATTCTACTTACTTATTAGTGAAATCAGAAAAAGATATAAATGATATAACTTTAGATTTAG TTAAAACAAGTAATTGGGAAGTAAACTAA
Upstream 100 bases:
>100_bases GACAATAAAGTTGGTTTATATGATATAGATTTAAATGTTAATTATGGAAATCAAGAGATATATAGTATAAAGGCTACAGA ATTTATAGGAGAGTGATAAT
Downstream 100 bases:
>100_bases CTATTAAGAGAAAGATGGTGATTAAATGAAAAATTTAAAATTAAGAAAAAGAGGTCTTTCTCTTATAGAATTAGTTGTAG CACTATCATTAATAACAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 702; Mature: 702
Protein sequence:
>702_residues MLYMKKKKGASLAYVIVVLAIIATIGTAIVSLSLANYKAIIVDSKKTQNLYMSESGLDEAKVKINNLTSKAVEAGNDAVT KSSIENLTSENIESTQNEIFKKEYKKYIQNNLKSLFKIKDGHVLFNTKGFKYEKEDNYYDIELVSINNNKLELVNKINQL GDLDKNFIFELSGNKKSDKEILTLRLNSKFNVKDGNEIKNYKDVSLTFEIEVPDYNGAYYTEKIPVYNIWQQGLVVGENL NINQNSNLNINGSAYVSANYSFEDNKSYKNSSQNKNASGIVISGGDLSVDNGILVSKQDIILNGENGELKVLSSLGGNNG GVYTHNLGIYSFENLNSNKVFGNSETLEGNKIDTKVPVYTMNDLIMNGLNSTIKLQDGFYGINSNSGDKTLTGEKQNSSA IIINSKDLGNGSSLDIKNKAVIMGSAYINTLGESYQTGESLAVKGNYVAYTYAVKGKDVEFKYYNPLQLVERINGDSSLD AKAKYFKEASKNFNIKSNGIKLPSSDDVISVGVTVDGNNDIKGNNLILDDIKKIREEYVDNYFRKVNVVNTETTISREKK YTNKITKDNDLIYIDINNGANVLKNIENSPLKIKDKLITINKSCNGIIITDKDIKIDSSIDFKGTIITTGNLDVLNKDTA KKQNISITYDEEYLKQLIGSNYEDFKGVFTGNPDSTYLLVKSEKDINDITLDLVKTSNWEVN
Sequences:
>Translated_702_residues MLYMKKKKGASLAYVIVVLAIIATIGTAIVSLSLANYKAIIVDSKKTQNLYMSESGLDEAKVKINNLTSKAVEAGNDAVT KSSIENLTSENIESTQNEIFKKEYKKYIQNNLKSLFKIKDGHVLFNTKGFKYEKEDNYYDIELVSINNNKLELVNKINQL GDLDKNFIFELSGNKKSDKEILTLRLNSKFNVKDGNEIKNYKDVSLTFEIEVPDYNGAYYTEKIPVYNIWQQGLVVGENL NINQNSNLNINGSAYVSANYSFEDNKSYKNSSQNKNASGIVISGGDLSVDNGILVSKQDIILNGENGELKVLSSLGGNNG GVYTHNLGIYSFENLNSNKVFGNSETLEGNKIDTKVPVYTMNDLIMNGLNSTIKLQDGFYGINSNSGDKTLTGEKQNSSA IIINSKDLGNGSSLDIKNKAVIMGSAYINTLGESYQTGESLAVKGNYVAYTYAVKGKDVEFKYYNPLQLVERINGDSSLD AKAKYFKEASKNFNIKSNGIKLPSSDDVISVGVTVDGNNDIKGNNLILDDIKKIREEYVDNYFRKVNVVNTETTISREKK YTNKITKDNDLIYIDINNGANVLKNIENSPLKIKDKLITINKSCNGIIITDKDIKIDSSIDFKGTIITTGNLDVLNKDTA KKQNISITYDEEYLKQLIGSNYEDFKGVFTGNPDSTYLLVKSEKDINDITLDLVKTSNWEVN >Mature_702_residues MLYMKKKKGASLAYVIVVLAIIATIGTAIVSLSLANYKAIIVDSKKTQNLYMSESGLDEAKVKINNLTSKAVEAGNDAVT KSSIENLTSENIESTQNEIFKKEYKKYIQNNLKSLFKIKDGHVLFNTKGFKYEKEDNYYDIELVSINNNKLELVNKINQL GDLDKNFIFELSGNKKSDKEILTLRLNSKFNVKDGNEIKNYKDVSLTFEIEVPDYNGAYYTEKIPVYNIWQQGLVVGENL NINQNSNLNINGSAYVSANYSFEDNKSYKNSSQNKNASGIVISGGDLSVDNGILVSKQDIILNGENGELKVLSSLGGNNG GVYTHNLGIYSFENLNSNKVFGNSETLEGNKIDTKVPVYTMNDLIMNGLNSTIKLQDGFYGINSNSGDKTLTGEKQNSSA IIINSKDLGNGSSLDIKNKAVIMGSAYINTLGESYQTGESLAVKGNYVAYTYAVKGKDVEFKYYNPLQLVERINGDSSLD AKAKYFKEASKNFNIKSNGIKLPSSDDVISVGVTVDGNNDIKGNNLILDDIKKIREEYVDNYFRKVNVVNTETTISREKK YTNKITKDNDLIYIDINNGANVLKNIENSPLKIKDKLITINKSCNGIIITDKDIKIDSSIDFKGTIITTGNLDVLNKDTA KKQNISITYDEEYLKQLIGSNYEDFKGVFTGNPDSTYLLVKSEKDINDITLDLVKTSNWEVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78011; Mature: 78011
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYMKKKKGASLAYVIVVLAIIATIGTAIVSLSLANYKAIIVDSKKTQNLYMSESGLDEA CCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCCEEEECCCCCCCC KVKINNLTSKAVEAGNDAVTKSSIENLTSENIESTQNEIFKKEYKKYIQNNLKSLFKIKD EEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC GHVLFNTKGFKYEKEDNYYDIELVSINNNKLELVNKINQLGDLDKNFIFELSGNKKSDKE CEEEEECCCCEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE ILTLRLNSKFNVKDGNEIKNYKDVSLTFEIEVPDYNGAYYTEKIPVYNIWQQGLVVGENL EEEEEECCEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCEEECCCCEEECCCC NINQNSNLNINGSAYVSANYSFEDNKSYKNSSQNKNASGIVISGGDLSVDNGILVSKQDI CCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEECCEE ILNGENGELKVLSSLGGNNGGVYTHNLGIYSFENLNSNKVFGNSETLEGNKIDTKVPVYT EEECCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCEEECCCCCCCCCCCCCCCCEEE MNDLIMNGLNSTIKLQDGFYGINSNSGDKTLTGEKQNSSAIIINSKDLGNGSSLDIKNKA HHHHHHCCCCCEEEEECCEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCEEECCCE VIMGSAYINTLGESYQTGESLAVKGNYVAYTYAVKGKDVEFKYYNPLQLVERINGDSSLD EEEEHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCEEEEEECCHHHHHHHCCCCCCCC AKAKYFKEASKNFNIKSNGIKLPSSDDVISVGVTVDGNNDIKGNNLILDDIKKIREEYVD HHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHH NYFRKVNVVNTETTISREKKYTNKITKDNDLIYIDINNGANVLKNIENSPLKIKDKLITI HHHHEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEEEEE NKSCNGIIITDKDIKIDSSIDFKGTIITTGNLDVLNKDTAKKQNISITYDEEYLKQLIGS ECCCCEEEEECCCEEECCCCCCEEEEEEECCCEEECCCCCCCCCEEEEECHHHHHHHHCC NYEDFKGVFTGNPDSTYLLVKSEKDINDITLDLVKTSNWEVN CCCHHCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MLYMKKKKGASLAYVIVVLAIIATIGTAIVSLSLANYKAIIVDSKKTQNLYMSESGLDEA CCEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEECCCCCEEEECCCCCCCC KVKINNLTSKAVEAGNDAVTKSSIENLTSENIESTQNEIFKKEYKKYIQNNLKSLFKIKD EEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECC GHVLFNTKGFKYEKEDNYYDIELVSINNNKLELVNKINQLGDLDKNFIFELSGNKKSDKE CEEEEECCCCEEECCCCEEEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCE ILTLRLNSKFNVKDGNEIKNYKDVSLTFEIEVPDYNGAYYTEKIPVYNIWQQGLVVGENL EEEEEECCEECCCCCCCCCCEEEEEEEEEEECCCCCCCEEEECCCCEEECCCCEEECCCC NINQNSNLNINGSAYVSANYSFEDNKSYKNSSQNKNASGIVISGGDLSVDNGILVSKQDI CCCCCCCEEECCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEECCEE ILNGENGELKVLSSLGGNNGGVYTHNLGIYSFENLNSNKVFGNSETLEGNKIDTKVPVYT EEECCCCCEEEEEECCCCCCCEEEEECCEEEECCCCCCEEECCCCCCCCCCCCCCCCEEE MNDLIMNGLNSTIKLQDGFYGINSNSGDKTLTGEKQNSSAIIINSKDLGNGSSLDIKNKA HHHHHHCCCCCEEEEECCEEECCCCCCCCEECCCCCCCCEEEEECCCCCCCCCEEECCCE VIMGSAYINTLGESYQTGESLAVKGNYVAYTYAVKGKDVEFKYYNPLQLVERINGDSSLD EEEEHHHHHHHCCCCCCCCEEEEECCEEEEEEEECCCEEEEEECCHHHHHHHCCCCCCCC AKAKYFKEASKNFNIKSNGIKLPSSDDVISVGVTVDGNNDIKGNNLILDDIKKIREEYVD HHHHHHHHHHCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHH NYFRKVNVVNTETTISREKKYTNKITKDNDLIYIDINNGANVLKNIENSPLKIKDKLITI HHHHEEEEEECCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCEEEEEEEEEE NKSCNGIIITDKDIKIDSSIDFKGTIITTGNLDVLNKDTAKKQNISITYDEEYLKQLIGS ECCCCEEEEECCCEEECCCCCCEEEEEEECCCEEECCCCCCCCCEEEEECHHHHHHHHCC NYEDFKGVFTGNPDSTYLLVKSEKDINDITLDLVKTSNWEVN CCCHHCEEEECCCCCEEEEEECCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA