Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18311260
Identifier: 18311260
GI number: 18311260
Start: 2621491
End: 2622051
Strand: Reverse
Name: 18311260
Synonym: CPE2278
Alternate gene names: NA
Gene position: 2622051-2621491 (Counterclockwise)
Preceding gene: 18311261
Following gene: 18311259
Centisome position: 86.5
GC content: 23.53
Gene sequence:
>561_bases ATGAAAAATTTAAAATTAAGAAAAAGAGGTCTTTCTCTTATAGAATTAGTTGTAGCACTATCATTAATAACAATCATATT AATGATAGTCAGCCCATTCTTTATTTCAAATTATGTAACTTTAGATAAGACAAGCAATCAAATAGATTTTCAAAGGGAAG CAAAGTCTATAATGAATTATTTTACTGAATCATCTATGGAAGCTTCAAAAATTTCAAGTATTAAAATTGATAATAGTAAG GATAGTATTGATCTAACTAGAAATAGTACAACCGTTGGTCTAGGAAAAGGAGATAATATATCAATAACATTTGATAATGA TGAATTAGATAATAATATAAAAACTACTTTTAGGTTAGAAAATGAAGTTTTATATTATAAAAAAGATAATAAAGAAGAGT TTCAGATAGGAAAATTTGTAAAAGATATAGAATTTAATGCCTTACCTAGTGGAAAAAATTTCAATATAGCTAACTCAATA GAGGTAAAAATAGAATTTGATACTAAGAATGCTACTCCATATGAGGTTAGTAATATATTAACTTTTAGAAATAAAAAATA A
Upstream 100 bases:
>100_bases TTAGTGAAATCAGAAAAAGATATAAATGATATAACTTTAGATTTAGTTAAAACAAGTAATTGGGAAGTAAACTAACTATT AAGAGAAAGATGGTGATTAA
Downstream 100 bases:
>100_bases AAGATGGGTTGGAGGTGAAATAGTTGATTAAGTTAGTTGATAATAGAAGAAATATTTTTATTTTTATATTAATAATAGGG ATAATAAGTTTAGTAAGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI EVKIEFDTKNATPYEVSNILTFRNKK
Sequences:
>Translated_186_residues MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI EVKIEFDTKNATPYEVSNILTFRNKK >Mature_186_residues MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI EVKIEFDTKNATPYEVSNILTFRNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21259; Mature: 21259
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH FTESSMEASKISSIKIDNSKDSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLE HHHCCCCHHHCEEEEECCCCCCEEEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEC NEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSIEVKIEFDTKNATPYEVSNIL CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHEE TFRNKK EECCCC >Mature Secondary Structure MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH FTESSMEASKISSIKIDNSKDSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLE HHHCCCCHHHCEEEEECCCCCCEEEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEC NEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSIEVKIEFDTKNATPYEVSNIL CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHEE TFRNKK EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA