Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311260

Identifier: 18311260

GI number: 18311260

Start: 2621491

End: 2622051

Strand: Reverse

Name: 18311260

Synonym: CPE2278

Alternate gene names: NA

Gene position: 2622051-2621491 (Counterclockwise)

Preceding gene: 18311261

Following gene: 18311259

Centisome position: 86.5

GC content: 23.53

Gene sequence:

>561_bases
ATGAAAAATTTAAAATTAAGAAAAAGAGGTCTTTCTCTTATAGAATTAGTTGTAGCACTATCATTAATAACAATCATATT
AATGATAGTCAGCCCATTCTTTATTTCAAATTATGTAACTTTAGATAAGACAAGCAATCAAATAGATTTTCAAAGGGAAG
CAAAGTCTATAATGAATTATTTTACTGAATCATCTATGGAAGCTTCAAAAATTTCAAGTATTAAAATTGATAATAGTAAG
GATAGTATTGATCTAACTAGAAATAGTACAACCGTTGGTCTAGGAAAAGGAGATAATATATCAATAACATTTGATAATGA
TGAATTAGATAATAATATAAAAACTACTTTTAGGTTAGAAAATGAAGTTTTATATTATAAAAAAGATAATAAAGAAGAGT
TTCAGATAGGAAAATTTGTAAAAGATATAGAATTTAATGCCTTACCTAGTGGAAAAAATTTCAATATAGCTAACTCAATA
GAGGTAAAAATAGAATTTGATACTAAGAATGCTACTCCATATGAGGTTAGTAATATATTAACTTTTAGAAATAAAAAATA
A

Upstream 100 bases:

>100_bases
TTAGTGAAATCAGAAAAAGATATAAATGATATAACTTTAGATTTAGTTAAAACAAGTAATTGGGAAGTAAACTAACTATT
AAGAGAAAGATGGTGATTAA

Downstream 100 bases:

>100_bases
AAGATGGGTTGGAGGTGAAATAGTTGATTAAGTTAGTTGATAATAGAAGAAATATTTTTATTTTTATATTAATAATAGGG
ATAATAAGTTTAGTAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK
DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI
EVKIEFDTKNATPYEVSNILTFRNKK

Sequences:

>Translated_186_residues
MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK
DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI
EVKIEFDTKNATPYEVSNILTFRNKK
>Mature_186_residues
MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNYFTESSMEASKISSIKIDNSK
DSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLENEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSI
EVKIEFDTKNATPYEVSNILTFRNKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21259; Mature: 21259

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH
FTESSMEASKISSIKIDNSKDSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLE
HHHCCCCHHHCEEEEECCCCCCEEEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEC
NEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSIEVKIEFDTKNATPYEVSNIL
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHEE
TFRNKK
EECCCC
>Mature Secondary Structure
MKNLKLRKRGLSLIELVVALSLITIILMIVSPFFISNYVTLDKTSNQIDFQREAKSIMNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCHHHHHHHHHHH
FTESSMEASKISSIKIDNSKDSIDLTRNSTTVGLGKGDNISITFDNDELDNNIKTTFRLE
HHHCCCCHHHCEEEEECCCCCCEEEECCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEC
NEVLYYKKDNKEEFQIGKFVKDIEFNALPSGKNFNIANSIEVKIEFDTKNATPYEVSNIL
CEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHEE
TFRNKK
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA