Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is pgi
Identifier: 18311249
GI number: 18311249
Start: 2605305
End: 2606657
Strand: Reverse
Name: pgi
Synonym: CPE2267
Alternate gene names: 18311249
Gene position: 2606657-2605305 (Counterclockwise)
Preceding gene: 18311250
Following gene: 18311248
Centisome position: 85.99
GC content: 33.63
Gene sequence:
>1353_bases ATGAAAAAAGGATTAGTTGTTGATTTATCAAAAGCAGCTCCATATTTAAAATCTCACGAAGTTGCTTACATGCAAGAAAC TATAAACCAAGCACACAATAAGTTACATAATGGAACAGGTGCAGGAAATGACTTCTTAGGATGGGTTGACCTACCAGTTA ATTATGATAAAGATGAGTTTGCTAGAATAAAAGAAGCTGCTAAAAAAATACAAAGTGATTCAGATGTATTAGTTGTTATA GGAATAGGTGGTTCTTACTTAGGAGCAAGAGCTGCTATAGAAATGTTAACTAACAACTTCTATAACTCTATGTCTAAAGA TAAGAGAAAAACTCCAGCTATATTCTACGCAGGAAATAACATAAGCTCAAGCTACATGGCTGATTTATTAAAAGCTATTG ATGGATTAGATGTAAGCTTAAATGTTATATCAAAATCAGGTACTACTACAGAACCTGCTATAGCTTTCAGAATCTTAAAA GATTACATGGAAAAGAAATACGGAAAAGAAGAAGCTAAGAAGAGAATATATGCTACAACAGACGCTAAGAAAGGTGCTTT AAAAACTTTAGCTGATGCTGAAGGATATGAAACTTTCGTAATTCCAGATGATGTTGGAGGAAGATTCTCAGTATTAACAG CAGTTGGATTATTACCAATAGCTGCAGCTGGAATAAACATAGATGAAATGATGGAAGGAGCTGCTGATGCTAGAGAAGAA TATGCTAATCCTTCATTAGCTGATAACGAATGTTACAAATATGCAGCTGCTAGAAATGCTTTATACAATAAAGGTAAAGC TATAGAAATATTAGTTAACTATGAGCCATCAGTTCATTACTTCAATGAATGGTGGAAACAATTATATGGAGAATCAGAAG GAAAAGACAACAAAGGATTATTCCCAGCTGCTGTTGATTTCTCAACTGATTTACACTCAATGGGACAATACATCCAAGAA GGTAGAAGAGATATCTTCGAAACAGTTATTAATGTAGGATCTCCAAGAGAAGAAATAGTAATCGAAGCTAACGATGAAAA CATAGATGGATTAAACTTCTTAGCTGGAAAAACTATGGACTATGTTAACAAACAAGCATTCAGAGGAACTTTACTTGCTC ACAATGATGGAGAAGTTCCAAACGTAGTTGTTAATGTTCCAGAATTAACTCCATACTACTTCGGAAGATTAGTTTACTTC TTCGAAAAAGCTTGTGGAATCAGTGGATATGTTTTAGGAATAAATCCATTTGACCAACCAGGTGTTGAAGCTTACAAGAA AAACATGTTTGCTTTACTTGGAAAACCAGGTTTTGAAGATTTAAAAGCTGAGTTAGAAGAAAGATTAAAATAA
Upstream 100 bases:
>100_bases TTCCAATGGTTTTTGGAGGCTTAATTATTTTTGCGATTATATTATATATATTAATGGCGTGGTTAAAATAAATTTATAAA CGCTAATGGAGGTAGTAATA
Downstream 100 bases:
>100_bases TATAAATTTAATTATAAAAAGGAGCTCTTTTTAGAGCTTCTTTTTTGTTTTAAGAGTATAATTTTATTAATATATAAATT ATTTATTATTTTAAGAGTAT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MKKGLVVDLSKAAPYLKSHEVAYMQETINQAHNKLHNGTGAGNDFLGWVDLPVNYDKDEFARIKEAAKKIQSDSDVLVVI GIGGSYLGARAAIEMLTNNFYNSMSKDKRKTPAIFYAGNNISSSYMADLLKAIDGLDVSLNVISKSGTTTEPAIAFRILK DYMEKKYGKEEAKKRIYATTDAKKGALKTLADAEGYETFVIPDDVGGRFSVLTAVGLLPIAAAGINIDEMMEGAADAREE YANPSLADNECYKYAAARNALYNKGKAIEILVNYEPSVHYFNEWWKQLYGESEGKDNKGLFPAAVDFSTDLHSMGQYIQE GRRDIFETVINVGSPREEIVIEANDENIDGLNFLAGKTMDYVNKQAFRGTLLAHNDGEVPNVVVNVPELTPYYFGRLVYF FEKACGISGYVLGINPFDQPGVEAYKKNMFALLGKPGFEDLKAELEERLK
Sequences:
>Translated_450_residues MKKGLVVDLSKAAPYLKSHEVAYMQETINQAHNKLHNGTGAGNDFLGWVDLPVNYDKDEFARIKEAAKKIQSDSDVLVVI GIGGSYLGARAAIEMLTNNFYNSMSKDKRKTPAIFYAGNNISSSYMADLLKAIDGLDVSLNVISKSGTTTEPAIAFRILK DYMEKKYGKEEAKKRIYATTDAKKGALKTLADAEGYETFVIPDDVGGRFSVLTAVGLLPIAAAGINIDEMMEGAADAREE YANPSLADNECYKYAAARNALYNKGKAIEILVNYEPSVHYFNEWWKQLYGESEGKDNKGLFPAAVDFSTDLHSMGQYIQE GRRDIFETVINVGSPREEIVIEANDENIDGLNFLAGKTMDYVNKQAFRGTLLAHNDGEVPNVVVNVPELTPYYFGRLVYF FEKACGISGYVLGINPFDQPGVEAYKKNMFALLGKPGFEDLKAELEERLK >Mature_450_residues MKKGLVVDLSKAAPYLKSHEVAYMQETINQAHNKLHNGTGAGNDFLGWVDLPVNYDKDEFARIKEAAKKIQSDSDVLVVI GIGGSYLGARAAIEMLTNNFYNSMSKDKRKTPAIFYAGNNISSSYMADLLKAIDGLDVSLNVISKSGTTTEPAIAFRILK DYMEKKYGKEEAKKRIYATTDAKKGALKTLADAEGYETFVIPDDVGGRFSVLTAVGLLPIAAAGINIDEMMEGAADAREE YANPSLADNECYKYAAARNALYNKGKAIEILVNYEPSVHYFNEWWKQLYGESEGKDNKGLFPAAVDFSTDLHSMGQYIQE GRRDIFETVINVGSPREEIVIEANDENIDGLNFLAGKTMDYVNKQAFRGTLLAHNDGEVPNVVVNVPELTPYYFGRLVYF FEKACGISGYVLGINPFDQPGVEAYKKNMFALLGKPGFEDLKAELEERLK
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family
Homologues:
Organism=Escherichia coli, GI1790457, Length=386, Percent_Identity=26.1658031088083, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6319673, Length=383, Percent_Identity=25.3263707571802, Blast_Score=77, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): G6PI_CLOP1 (Q0TN51)
Other databases:
- EMBL: CP000246 - RefSeq: YP_696939.1 - ProteinModelPortal: Q0TN51 - SMR: Q0TN51 - STRING: Q0TN51 - GeneID: 4202200 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_2549 - TIGR: CPF_2549 - eggNOG: COG0166 - HOGENOM: HBG615843 - OMA: YVNDRAY - ProtClustDB: PRK14097 - BioCyc: CPER195103:CPF_2549-MONOMER - GO: GO:0005737 - GO: GO:0006094 - GO: GO:0006096 - HAMAP: MF_00473 - InterPro: IPR001672 - InterPro: IPR018189 - PANTHER: PTHR11469 - PRINTS: PR00662
Pfam domain/function: PF00342 PGI
EC number: =5.3.1.9
Molecular weight: Translated: 49772; Mature: 49772
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1; PS00174 P_GLUCOSE_ISOMERASE_2; PS51463 P_GLUCOSE_ISOMERASE_3
Important sites: ACT_SITE 291-291 ACT_SITE 312-312 ACT_SITE 426-426
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLVVDLSKAAPYLKSHEVAYMQETINQAHNKLHNGTGAGNDFLGWVDLPVNYDKDEF CCCCEEEECHHCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHH ARIKEAAKKIQSDSDVLVVIGIGGSYLGARAAIEMLTNNFYNSMSKDKRKTPAIFYAGNN HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC ISSSYMADLLKAIDGLDVSLNVISKSGTTTEPAIAFRILKDYMEKKYGKEEAKKRIYATT CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEEEC DAKKGALKTLADAEGYETFVIPDDVGGRFSVLTAVGLLPIAAAGINIDEMMEGAADAREE CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YANPSLADNECYKYAAARNALYNKGKAIEILVNYEPSVHYFNEWWKQLYGESEGKDNKGL HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC FPAAVDFSTDLHSMGQYIQEGRRDIFETVINVGSPREEIVIEANDENIDGLNFLAGKTMD CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCHHH YVNKQAFRGTLLAHNDGEVPNVVVNVPELTPYYFGRLVYFFEKACGISGYVLGINPFDQP HHHHHHHCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GVEAYKKNMFALLGKPGFEDLKAELEERLK CHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MKKGLVVDLSKAAPYLKSHEVAYMQETINQAHNKLHNGTGAGNDFLGWVDLPVNYDKDEF CCCCEEEECHHCCCCHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHH ARIKEAAKKIQSDSDVLVVIGIGGSYLGARAAIEMLTNNFYNSMSKDKRKTPAIFYAGNN HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC ISSSYMADLLKAIDGLDVSLNVISKSGTTTEPAIAFRILKDYMEKKYGKEEAKKRIYATT CCHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHEEEEC DAKKGALKTLADAEGYETFVIPDDVGGRFSVLTAVGLLPIAAAGINIDEMMEGAADAREE CCCCHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YANPSLADNECYKYAAARNALYNKGKAIEILVNYEPSVHYFNEWWKQLYGESEGKDNKGL HCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCC FPAAVDFSTDLHSMGQYIQEGRRDIFETVINVGSPREEIVIEANDENIDGLNFLAGKTMD CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCCHHH YVNKQAFRGTLLAHNDGEVPNVVVNVPELTPYYFGRLVYFFEKACGISGYVLGINPFDQP HHHHHHHCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCC GVEAYKKNMFALLGKPGFEDLKAELEERLK CHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA