Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yaiI [C]

Identifier: 18311248

GI number: 18311248

Start: 2604658

End: 2605107

Strand: Reverse

Name: yaiI [C]

Synonym: CPE2266

Alternate gene names: 18311248

Gene position: 2605107-2604658 (Counterclockwise)

Preceding gene: 18311249

Following gene: 18311247

Centisome position: 85.94

GC content: 29.33

Gene sequence:

>450_bases
GTGAAAATAATTATTGATGGTGATGGATGTGCAGGAAGAGATATAATTGAAGAGGTTGGTAAAAAGCATTCAGTTAAAAT
ATTAATTTATTGCACAATAAATCATATGATAAATTCAGATTACTCTGAGGTGAGAATGGTTGATGGTGGATTTCAAAGCG
TAGATATGTATGTGGCTAATAATACTGAGGAAAATGATATTGTAATAACTCAAGATTATGGAGTTGCAGCTATGGCTTTA
GGAAAAGGAGCTTTAGCCATTAGCCCTAGAGGATATATTTATGACAATGATAATATTGATAGATTACTTTTTGAAAGACA
TTTAAGTCAAAAAAATAGAAGAGCTGGTGGGAAATCAAAAGGAAATCATAAAAGAAATAAAGAAGATGATGATAGACTTT
ATTATAATTTAGAAGTTTTGATAGAAAAGGTAAAGGCTATTTTAAATTAG

Upstream 100 bases:

>100_bases
TATTAGTAAATTAATAAGAATGTGTATAATTTTATTAATGGATAATTATTTAATATTCAAAAAAAGATAATAGAGAATAT
ATTATGGGAGGATTATAAAG

Downstream 100 bases:

>100_bases
ATATAATAAAATAAGGTTTGAAAAATTAAAAAATAAGTTTGGAAAATTAAAAAATAAACTTTGTAGAATTAGAAGATAAA
CTTAATAAATAATGTAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKIIIDGDGCAGRDIIEEVGKKHSVKILIYCTINHMINSDYSEVRMVDGGFQSVDMYVANNTEENDIVITQDYGVAAMAL
GKGALAISPRGYIYDNDNIDRLLFERHLSQKNRRAGGKSKGNHKRNKEDDDRLYYNLEVLIEKVKAILN

Sequences:

>Translated_149_residues
MKIIIDGDGCAGRDIIEEVGKKHSVKILIYCTINHMINSDYSEVRMVDGGFQSVDMYVANNTEENDIVITQDYGVAAMAL
GKGALAISPRGYIYDNDNIDRLLFERHLSQKNRRAGGKSKGNHKRNKEDDDRLYYNLEVLIEKVKAILN
>Mature_149_residues
MKIIIDGDGCAGRDIIEEVGKKHSVKILIYCTINHMINSDYSEVRMVDGGFQSVDMYVANNTEENDIVITQDYGVAAMAL
GKGALAISPRGYIYDNDNIDRLLFERHLSQKNRRAGGKSKGNHKRNKEDDDRLYYNLEVLIEKVKAILN

Specific function: Unknown

COG id: COG1671

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0178 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003791 [H]

Pfam domain/function: PF02639 DUF188 [H]

EC number: NA

Molecular weight: Translated: 16824; Mature: 16824

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIIDGDGCAGRDIIEEVGKKHSVKILIYCTINHMINSDYSEVRMVDGGFQSVDMYVAN
CEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEEECHHCCCCHHEEEECCCCCEEEEEEEC
NTEENDIVITQDYGVAAMALGKGALAISPRGYIYDNDNIDRLLFERHLSQKNRRAGGKSK
CCCCCCEEEECCCCEEEEEECCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
GNHKRNKEDDDRLYYNLEVLIEKVKAILN
CCCCCCCCCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIIIDGDGCAGRDIIEEVGKKHSVKILIYCTINHMINSDYSEVRMVDGGFQSVDMYVAN
CEEEECCCCCCCHHHHHHCCCCCCEEEEEEEEEECHHCCCCHHEEEECCCCCEEEEEEEC
NTEENDIVITQDYGVAAMALGKGALAISPRGYIYDNDNIDRLLFERHLSQKNRRAGGKSK
CCCCCCEEEECCCCEEEEEECCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCC
GNHKRNKEDDDRLYYNLEVLIEKVKAILN
CCCCCCCCCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA