Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311247

Identifier: 18311247

GI number: 18311247

Start: 2602225

End: 2604285

Strand: Reverse

Name: 18311247

Synonym: CPE2265

Alternate gene names: NA

Gene position: 2604285-2602225 (Counterclockwise)

Preceding gene: 18311248

Following gene: 18311246

Centisome position: 85.91

GC content: 27.12

Gene sequence:

>2061_bases
ATGGGAGAATTACTTTTAGAGTTAGATACGAGAGATATAATAGAACATAATAGTCCGGTTAACATAAAAATAATAAATAA
CACTAATGACAATTTAAGATATAAAATCTTAATAGGAAAGGATGGAATTTGGGAAACTTTAAGGGAATTTGAAAAAGGAA
ATGAATTTATCTGGAATCCTAAAGAAGATGGAGAGTATATGATTATGGTTCAAGGAAGAAAAGAGGATTCAAATAAGCCT
TTTGATTACAAAGTTACTGAGGGAGTTAATGTGAAAAGAACAGTTCATGGCCTTCAAGATGAAATGAATAAAGATGAAAT
AAATAAAGATGAAATTAAAGAAGAAAAATTAATAAAAGGAATCTATCTAAATAAAGATGTATTTAATGTTGGAGAGAAGG
CAGAGTTAAAGGTTGATAGTAACAATGAAAATATTATGTATAGATATTTTATAAGTGGAAAGAACGGATGGCAACTTATA
AAGGATTATACATTAGAAAATAAATTAAATTATACTATTAATGAAAGTGGTCAATTCGAGTTTTTAATTGAATGTAAAAA
AACAAGTTCAACTAATACAACAGATGATTATGCCACAGTTATATTTACATCAAAAGAATTTGTAAAGCCTGAAATAATTA
ATTTTATTAATTTAAGTGAAAAATTAATAGTAAATTCAGAGCTTACCTTTGAAGTGGAAGCAAATTTTGAAGATGAAAGA
ACAGCACTATATAAGTTTGTAAAAATTTCACCTGATGGAAGTAGAACTTGCATTCAAGATTTTTCATCAAGCCGTATAGT
AACTTTTAAAGAATTTAAAGAGGGAAGATATAAGCTTTTATGTTTAATAAGAGATATGTATTCTAATAAGGAATTTGATG
ATAGAGCCGTTATGGTATATGATATAAAACCATATGAACCATTACAATTAAGAAGTTTTACTACAGATTTAAGCTCACCT
CAAGAAAAAGGAGAGGTAATAGAGATAAAAGCTGTTATTGATGGAGGAAGTGATATCCTCTATAGATTTAAAATAGATGG
AGAAATATCTGAGGATACGGGTTATACAAGAAATAGTACTTTAAAATGGAATGCTAAAAAAGAAGGAAATTATAGAATAA
CTCTTTGGGCTAAGGATGAATCCTTTATTGGAGATTATGAAATAGAATCTAAATTAGATTATAAAATAGAAAAAAAGGTG
AAAAAGCCAATAAAAATAACAGAATTAATATTTGATAGAGATAAGACCCCTTTAATAAATGAAGTAATAAAACTTAGGGT
TAGTGCAGAGGGTGGTACTGACTTAAAATATTCCTTCTTAATAATTAAGGATGGTAAAACCATAGAAAGTATTGATTTTG
GAAGTAATAATTGGGTAGAATTTATTCCAAATGAAAAAGGAAATTATCAGCTTGATGTAAGAGTAAAAGATAAGTATTCA
ACAAAGGAATATGATGTGCATACTGTTTTAAATTTTAAAGTTAGGGAGTATGCAGAAGGGAAGATTGATCATATATTAGT
TCCAGCAAAGGAATATTTTTTAGTTGGAGATGATATTGATATTGAAGTAATAGTTCAAAATACTAGACAAGTAAAGGTTA
AGTATGTTACTAAGGTAAATGGACAAGTAGTAGAGGAAACTGATTATGTAAAAAATAAGAGGTTTAAAGTTACTCCAAAA
TGTCCAGGAAAATACACAATTGATATATTTGCTAGAAATATTAAATGTAAAGAGGGATTTGATTCAAGAAGAGAAGTAAG
ATTTTATGTTAGTGAAGCCTTACCTATTACAGGCACTAAAATAAGTACTTCTGATAAAGTCTTTAAAATTAATGAAGAGA
TAAACTTTTCTACAAAATGTGAAGGTGGAAGTAGAGTTTGCTATGAATATTATATAATGGTTAACGGAAATTGGTCTTTA
GTTCAAAAATATAGTAGAAAGAGTTATTATTCTTTTAGACCATATGTACCAGGAAAGTATAAAGTTTTAGTATTAACTAA
AAGTTATTATAAAAAATGTGCTTATGAGGACTATGATACTTTTGAATTTAAGGTAGAATAA

Upstream 100 bases:

>100_bases
GAGTGTTTTATGGTAAGAAAAATAGAAAATATTTACATAAAAACAGAAGTATAATATAATTTATTTATCTATAATGTTTC
GGGTTTTAGGGGGAGTGATT

Downstream 100 bases:

>100_bases
AATATTAAAGTTTAATATATATTTAGGACTTTGTTTTACATAATATTAATTTTAAGATAAGCTTTTAAGACTAATATTAG
TTTTAAATTATTTGAATTTA

Product: triple tyrosine motif-containing protein

Products: NA

Alternate protein names: Triple Tyrosine Motif-Containing Protein; Two Component Regulator Three Y Motif Protein; Two Component Regulator Three Y Domain-Containing Protein; SpoIID-Like Domain-Containing Protein; SpoIID/LytB Domain-Containing Protein; SpoIID/LytB Domain Protein; Beta-N-Acetylglucosaminidase

Number of amino acids: Translated: 686; Mature: 685

Protein sequence:

>686_residues
MGELLLELDTRDIIEHNSPVNIKIINNTNDNLRYKILIGKDGIWETLREFEKGNEFIWNPKEDGEYMIMVQGRKEDSNKP
FDYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKGIYLNKDVFNVGEKAELKVDSNNENIMYRYFISGKNGWQLI
KDYTLENKLNYTINESGQFEFLIECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSEKLIVNSELTFEVEANFEDER
TALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLCLIRDMYSNKEFDDRAVMVYDIKPYEPLQLRSFTTDLSSP
QEKGEVIEIKAVIDGGSDILYRFKIDGEISEDTGYTRNSTLKWNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKV
KKPIKITELIFDRDKTPLINEVIKLRVSAEGGTDLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLDVRVKDKYS
TKEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVNGQVVEETDYVKNKRFKVTPK
CPGKYTIDIFARNIKCKEGFDSRREVRFYVSEALPITGTKISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSL
VQKYSRKSYYSFRPYVPGKYKVLVLTKSYYKKCAYEDYDTFEFKVE

Sequences:

>Translated_686_residues
MGELLLELDTRDIIEHNSPVNIKIINNTNDNLRYKILIGKDGIWETLREFEKGNEFIWNPKEDGEYMIMVQGRKEDSNKP
FDYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKGIYLNKDVFNVGEKAELKVDSNNENIMYRYFISGKNGWQLI
KDYTLENKLNYTINESGQFEFLIECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSEKLIVNSELTFEVEANFEDER
TALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLCLIRDMYSNKEFDDRAVMVYDIKPYEPLQLRSFTTDLSSP
QEKGEVIEIKAVIDGGSDILYRFKIDGEISEDTGYTRNSTLKWNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKV
KKPIKITELIFDRDKTPLINEVIKLRVSAEGGTDLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLDVRVKDKYS
TKEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVNGQVVEETDYVKNKRFKVTPK
CPGKYTIDIFARNIKCKEGFDSRREVRFYVSEALPITGTKISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSL
VQKYSRKSYYSFRPYVPGKYKVLVLTKSYYKKCAYEDYDTFEFKVE
>Mature_685_residues
GELLLELDTRDIIEHNSPVNIKIINNTNDNLRYKILIGKDGIWETLREFEKGNEFIWNPKEDGEYMIMVQGRKEDSNKPF
DYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKGIYLNKDVFNVGEKAELKVDSNNENIMYRYFISGKNGWQLIK
DYTLENKLNYTINESGQFEFLIECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSEKLIVNSELTFEVEANFEDERT
ALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLCLIRDMYSNKEFDDRAVMVYDIKPYEPLQLRSFTTDLSSPQ
EKGEVIEIKAVIDGGSDILYRFKIDGEISEDTGYTRNSTLKWNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKVK
KPIKITELIFDRDKTPLINEVIKLRVSAEGGTDLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLDVRVKDKYST
KEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVNGQVVEETDYVKNKRFKVTPKC
PGKYTIDIFARNIKCKEGFDSRREVRFYVSEALPITGTKISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSLV
QKYSRKSYYSFRPYVPGKYKVLVLTKSYYKKCAYEDYDTFEFKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80242; Mature: 80111

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGELLLELDTRDIIEHNSPVNIKIINNTNDNLRYKILIGKDGIWETLREFEKGNEFIWNP
CCCEEEEECCHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECC
KEDGEYMIMVQGRKEDSNKPFDYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKG
CCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
IYLNKDVFNVGEKAELKVDSNNENIMYRYFISGKNGWQLIKDYTLENKLNYTINESGQFE
EEECCHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCEE
FLIECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSEKLIVNSELTFEVEANFEDER
EEEEEECCCCCCCCCCEEEEEEECHHHCCCHHHHHCCCCCEEEEECEEEEEEECCCCCCC
TALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLCLIRDMYSNKEFDDRAVMVY
EEEEEEEEECCCCCHHHHHHCCCCEEEEEHHHCCCCEEEEEEEEHHHCCCCCCCCEEEEE
DIKPYEPLQLRSFTTDLSSPQEKGEVIEIKAVIDGGSDILYRFKIDGEISEDTGYTRNST
ECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCEECCCCCCCCCCE
LKWNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKVKKPIKITELIFDRDKTPLIN
EEEECCCCCCEEEEEEECCCCCCCCEEECCCCCEEHHHHHCCCCEEEEHEECCCCCHHHH
EVIKLRVSAEGGTDLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLDVRVKDKYS
HEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCC
TKEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVN
CCEEEEEEEEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEEECCEEEEEEEEEECC
GQVVEETDYVKNKRFKVTPKCPGKYTIDIFARNIKCKEGFDSRREVRFYVSEALPITGTK
CEEEECCHHHCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCE
ISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSLVQKYSRKSYYSFRPYVPGKY
ECCCCCEEEECCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCEECCCCCCCE
KVLVLTKSYYKKCAYEDYDTFEFKVE
EEEEEEHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure 
GELLLELDTRDIIEHNSPVNIKIINNTNDNLRYKILIGKDGIWETLREFEKGNEFIWNP
CCEEEEECCHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECC
KEDGEYMIMVQGRKEDSNKPFDYKVTEGVNVKRTVHGLQDEMNKDEINKDEIKEEKLIKG
CCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHEE
IYLNKDVFNVGEKAELKVDSNNENIMYRYFISGKNGWQLIKDYTLENKLNYTINESGQFE
EEECCHHHCCCCCEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCCCEE
FLIECKKTSSTNTTDDYATVIFTSKEFVKPEIINFINLSEKLIVNSELTFEVEANFEDER
EEEEEECCCCCCCCCCEEEEEEECHHHCCCHHHHHCCCCCEEEEECEEEEEEECCCCCCC
TALYKFVKISPDGSRTCIQDFSSSRIVTFKEFKEGRYKLLCLIRDMYSNKEFDDRAVMVY
EEEEEEEEECCCCCHHHHHHCCCCEEEEEHHHCCCCEEEEEEEEHHHCCCCCCCCEEEEE
DIKPYEPLQLRSFTTDLSSPQEKGEVIEIKAVIDGGSDILYRFKIDGEISEDTGYTRNST
ECCCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCEEEEEEEECCEECCCCCCCCCCE
LKWNAKKEGNYRITLWAKDESFIGDYEIESKLDYKIEKKVKKPIKITELIFDRDKTPLIN
EEEECCCCCCEEEEEEECCCCCCCCEEECCCCCEEHHHHHCCCCEEEEHEECCCCCHHHH
EVIKLRVSAEGGTDLKYSFLIIKDGKTIESIDFGSNNWVEFIPNEKGNYQLDVRVKDKYS
HEEEEEEECCCCCCEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCC
TKEYDVHTVLNFKVREYAEGKIDHILVPAKEYFLVGDDIDIEVIVQNTRQVKVKYVTKVN
CCEEEEEEEEEEEEEECCCCCEEEEEECCCCEEEECCCCEEEEEEECCEEEEEEEEEECC
GQVVEETDYVKNKRFKVTPKCPGKYTIDIFARNIKCKEGFDSRREVRFYVSEALPITGTK
CEEEECCHHHCCCCEEECCCCCCCEEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCE
ISTSDKVFKINEEINFSTKCEGGSRVCYEYYIMVNGNWSLVQKYSRKSYYSFRPYVPGKY
ECCCCCEEEECCCCCEEEECCCCCEEEEEEEEEECCCHHHHHHHHCCCCCEECCCCCCCE
KVLVLTKSYYKKCAYEDYDTFEFKVE
EEEEEEHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA