Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ysnB [H]

Identifier: 18311234

GI number: 18311234

Start: 2586002

End: 2586472

Strand: Reverse

Name: ysnB [H]

Synonym: CPE2252

Alternate gene names: 18311234

Gene position: 2586472-2586002 (Counterclockwise)

Preceding gene: 18311235

Following gene: 18311233

Centisome position: 85.32

GC content: 29.3

Gene sequence:

>471_bases
ATGAAAGTAGCTATAGTCAGTGATACACATGGAGTTACTCATGTTATTGAATATATAAAAACTTTACTAAATGATTCAGA
TGTTCTTATACATTTAGGAGATAATATAAATGATGTTAAGTTATTAAGTGAAGGTTTTAAGGGAAAGGTATATTCTGTTG
TAGGAAACTGTGACTATGAAAGAAATGGGCAAGTTGAGCAAGTTATTGAAATTGAAGGCAAAAAATTTCTAATAACTCAT
GGTCATAAATATACAGTTAAGTATGGATTAGATAAAATTTACTATAGAGGACTTGAATTAGGGGTAGATGGAGTGATTTT
TGGTCATACTCATAGAAAAGTAGCACTAAAAGAAGGAGATATGTGGATAATAAATCCTGGTAGTCCATCAATACCTAAAG
ATGGAGAGGCAAGTATAGCTTTTATGAATGTAGATTCTGAAAATATAGAAGTAAGATTTTTTTCTATTTAA

Upstream 100 bases:

>100_bases
AAATGACTTCAGATGAAAAGAATGCTATTAGCCATAGGGGAAGAGCTTTAGAAAAACTAAAGGATAATTTAAAAGGGATA
CTTAAATAGGAGGAGAAGAA

Downstream 100 bases:

>100_bases
TTAGAATTAAATTAAAAAATAAGTGTTAATACATAAAAAAAGCTTATGTATTAGCACTTTTTTTAAAAAGAAAACATAGA
TTTTATCAGGGTTTCAGAGG

Product: Ser/Thr protein phosphatase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKVAIVSDTHGVTHVIEYIKTLLNDSDVLIHLGDNINDVKLLSEGFKGKVYSVVGNCDYERNGQVEQVIEIEGKKFLITH
GHKYTVKYGLDKIYYRGLELGVDGVIFGHTHRKVALKEGDMWIINPGSPSIPKDGEASIAFMNVDSENIEVRFFSI

Sequences:

>Translated_156_residues
MKVAIVSDTHGVTHVIEYIKTLLNDSDVLIHLGDNINDVKLLSEGFKGKVYSVVGNCDYERNGQVEQVIEIEGKKFLITH
GHKYTVKYGLDKIYYRGLELGVDGVIFGHTHRKVALKEGDMWIINPGSPSIPKDGEASIAFMNVDSENIEVRFFSI
>Mature_156_residues
MKVAIVSDTHGVTHVIEYIKTLLNDSDVLIHLGDNINDVKLLSEGFKGKVYSVVGNCDYERNGQVEQVIEIEGKKFLITH
GHKYTVKYGLDKIYYRGLELGVDGVIFGHTHRKVALKEGDMWIINPGSPSIPKDGEASIAFMNVDSENIEVRFFSI

Specific function: Unknown

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 17452; Mature: 17452

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50817 INTEIN_N_TER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIVSDTHGVTHVIEYIKTLLNDSDVLIHLGDNINDVKLLSEGFKGKVYSVVGNCDYE
CEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCC
RNGQVEQVIEIEGKKFLITHGHKYTVKYGLDKIYYRGLELGVDGVIFGHTHRKVALKEGD
CCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEECCEEECCCEEEEECCCEEEEEECCC
MWIINPGSPSIPKDGEASIAFMNVDSENIEVRFFSI
EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC
>Mature Secondary Structure
MKVAIVSDTHGVTHVIEYIKTLLNDSDVLIHLGDNINDVKLLSEGFKGKVYSVVGNCDYE
CEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEEEECCCCC
RNGQVEQVIEIEGKKFLITHGHKYTVKYGLDKIYYRGLELGVDGVIFGHTHRKVALKEGD
CCCCEEEEEEECCCEEEEECCCEEEEEECCCCCEECCEEECCCEEEEECCCEEEEEECCC
MWIINPGSPSIPKDGEASIAFMNVDSENIEVRFFSI
EEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]