| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311228
Identifier: 18311228
GI number: 18311228
Start: 2573156
End: 2573617
Strand: Reverse
Name: 18311228
Synonym: CPE2246
Alternate gene names: NA
Gene position: 2573617-2573156 (Counterclockwise)
Preceding gene: 18311229
Following gene: 18311225
Centisome position: 84.9
GC content: 29.22
Gene sequence:
>462_bases GTGGCTACATTTTTTAATAATTACGAAGAATTATTTACAGCTTTAGACACTAAAGAAACTCCAATAGGAATTTTACCTTT AGATGTTTTAAATAAAAAAATCAAAGATAATGCTAATATAACAAGAATTGATTTCCAAGAAGGTGTACCTGTTATAACTG AATGTGCAGGTATATTAAAATCAGCTCCTAATCCAAATGCTTCAGAACTATTTATGGAGTTTGTAGCTGGGCCAAAAGTT CAGTTAGAACTAGCTCAGAAATTTAATATAATGCCTACATTACCTGTAGCAATAAAATATTCTCCTGACTGGATTAAGAA TTTTAAAACTTTAGATATAGATAATAATGTTGTTCTTGAGAATGAAGATAAATGGGTTCAATTTTTTAATGGTGTTGTTA AACCAGAAGTACCTGCCAAGACAACTAACAATCCTGTTATTAAAGGTAAGAAGAAATCTTAA
Upstream 100 bases:
>100_bases ATACAAAGTATTTTATATCTGCTACGGCTTCTTATTTAAGTAAAGAAGCAATAATGATGATAATATAGGAAGTACTTTCT TACAAGGTGTAAAGTTAAAT
Downstream 100 bases:
>100_bases TACATATTAAAAAAGAGATATTATGTTTTAAACATAATATCTCTTTTATATTTAAAGTGTGAATTGTAAATAGCTTATTC GTATTTAAATTTAATGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MATFFNNYEELFTALDTKETPIGILPLDVLNKKIKDNANITRIDFQEGVPVITECAGILKSAPNPNASELFMEFVAGPKV QLELAQKFNIMPTLPVAIKYSPDWIKNFKTLDIDNNVVLENEDKWVQFFNGVVKPEVPAKTTNNPVIKGKKKS
Sequences:
>Translated_153_residues MATFFNNYEELFTALDTKETPIGILPLDVLNKKIKDNANITRIDFQEGVPVITECAGILKSAPNPNASELFMEFVAGPKV QLELAQKFNIMPTLPVAIKYSPDWIKNFKTLDIDNNVVLENEDKWVQFFNGVVKPEVPAKTTNNPVIKGKKKS >Mature_152_residues ATFFNNYEELFTALDTKETPIGILPLDVLNKKIKDNANITRIDFQEGVPVITECAGILKSAPNPNASELFMEFVAGPKVQ LELAQKFNIMPTLPVAIKYSPDWIKNFKTLDIDNNVVLENEDKWVQFFNGVVKPEVPAKTTNNPVIKGKKKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17168; Mature: 17037
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFFNNYEELFTALDTKETPIGILPLDVLNKKIKDNANITRIDFQEGVPVITECAGILK CCCCCCCHHHHHHHHCCCCCCCEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH SAPNPNASELFMEFVAGPKVQLELAQKFNIMPTLPVAIKYSPDWIKNFKTLDIDNNVVLE CCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEEEECHHHHCCCEEEECCCCEEEE NEDKWVQFFNGVVKPEVPAKTTNNPVIKGKKKS CCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure ATFFNNYEELFTALDTKETPIGILPLDVLNKKIKDNANITRIDFQEGVPVITECAGILK CCCCCCHHHHHHHHCCCCCCCEEECHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHH SAPNPNASELFMEFVAGPKVQLELAQKFNIMPTLPVAIKYSPDWIKNFKTLDIDNNVVLE CCCCCCHHHHHHHHHCCCCEEEEEHHHCCCCCCCCEEEEECHHHHCCCEEEECCCCEEEE NEDKWVQFFNGVVKPEVPAKTTNNPVIKGKKKS CCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA