| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is smtA [H]
Identifier: 18311225
GI number: 18311225
Start: 2570886
End: 2571689
Strand: Reverse
Name: smtA [H]
Synonym: CPE2243
Alternate gene names: 18311225
Gene position: 2571689-2570886 (Counterclockwise)
Preceding gene: 18311228
Following gene: 18311224
Centisome position: 84.83
GC content: 27.49
Gene sequence:
>804_bases ATGACAGATATTATAAGAGAGTACTATAATAAAAATAGTAAGAATGAATGGCTTAGATTAAATGATCCATATAATAGATT AGAATTATTTAGTACTATGTACATGATAAAAGAGTATTTTCCTCAAGAAGGAAAAATATTAGATATAGGTTCAGGACCGG GAAGATATTCAATAGAGCTATTAAAAAGAGGATATGAAGTCAGTTTAATGGATTTGTCAGAAAAATCTATAGATATGGCA AAAAATAATATAGAAAGTATGGGATTAAAAGCAAATGACTATATTTGTGGAGATGCTTTATATTTAGACTTTATAAAAGA TAATACCTTTGATGGAATACTTCTTATGGGGCCTATGTATCATGTTAAGTCAAGGGAAGATAGAATTAGAATATTAGAAA ATTGCATGAGAATATTAAAACCAGGTGGCATTATATTAATAGCTTATATAAATTCCTTAGGAGTATTAAAGGTAGGTCTT TCAGATTTCCCACAAGAGTATAAAGATATAAATAAGATATATGATTTATTTGATGAAAAAGGATTTAGTCAGGAAGAATC TTTTACTGAAACATACTTTACTGTGCCAGAAAAGGCTATTTCTGAGGTTAATGAGGTAGGTTTTAATATATTAAGTAGAG CAGGGGCTGAAAGCTTTTTAAGTGGACAAGCTTTTTATATGACTAAATATTATTTAGAGGACAAGGAAATATATTTTAAT TTATTAAAGGTTGCAACTGAAAAATGTGAAGATGAAAGATTTAGAGATTCAACAGAACATCTTATAATAGTTGCTAAAAA ATAA
Upstream 100 bases:
>100_bases AAATCAATTTTAACATAGTTAATTATTACAATTAAAGAGGATATATAGAATTTTAAAAGAATATATAAATTATCACACAT AATAAATGACGAGGTGTTTT
Downstream 100 bases:
>100_bases TAGTATTTTAAAGGTTAAATAGTTTATTTATATAAATAATAACTATGAGAATTAATTTGAATCTATGGTTTAAAAGCTAT AGTAGCTATAAAATATAAAA
Product: S-adenosylmethionine-dependent methltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTDIIREYYNKNSKNEWLRLNDPYNRLELFSTMYMIKEYFPQEGKILDIGSGPGRYSIELLKRGYEVSLMDLSEKSIDMA KNNIESMGLKANDYICGDALYLDFIKDNTFDGILLMGPMYHVKSREDRIRILENCMRILKPGGIILIAYINSLGVLKVGL SDFPQEYKDINKIYDLFDEKGFSQEESFTETYFTVPEKAISEVNEVGFNILSRAGAESFLSGQAFYMTKYYLEDKEIYFN LLKVATEKCEDERFRDSTEHLIIVAKK
Sequences:
>Translated_267_residues MTDIIREYYNKNSKNEWLRLNDPYNRLELFSTMYMIKEYFPQEGKILDIGSGPGRYSIELLKRGYEVSLMDLSEKSIDMA KNNIESMGLKANDYICGDALYLDFIKDNTFDGILLMGPMYHVKSREDRIRILENCMRILKPGGIILIAYINSLGVLKVGL SDFPQEYKDINKIYDLFDEKGFSQEESFTETYFTVPEKAISEVNEVGFNILSRAGAESFLSGQAFYMTKYYLEDKEIYFN LLKVATEKCEDERFRDSTEHLIIVAKK >Mature_266_residues TDIIREYYNKNSKNEWLRLNDPYNRLELFSTMYMIKEYFPQEGKILDIGSGPGRYSIELLKRGYEVSLMDLSEKSIDMAK NNIESMGLKANDYICGDALYLDFIKDNTFDGILLMGPMYHVKSREDRIRILENCMRILKPGGIILIAYINSLGVLKVGLS DFPQEYKDINKIYDLFDEKGFSQEESFTETYFTVPEKAISEVNEVGFNILSRAGAESFLSGQAFYMTKYYLEDKEIYFNL LKVATEKCEDERFRDSTEHLIIVAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787151, Length=238, Percent_Identity=24.3697478991597, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 31059; Mature: 30928
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIIREYYNKNSKNEWLRLNDPYNRLELFSTMYMIKEYFPQEGKILDIGSGPGRYSIEL CHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHH LKRGYEVSLMDLSEKSIDMAKNNIESMGLKANDYICGDALYLDFIKDNTFDGILLMGPMY HHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHEEEEHHCCCCCCEEEECCHH HVKSREDRIRILENCMRILKPGGIILIAYINSLGVLKVGLSDFPQEYKDINKIYDLFDEK HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCC GFSQEESFTETYFTVPEKAISEVNEVGFNILSRAGAESFLSGQAFYMTKYYLEDKEIYFN CCCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEEEECHHHHHHH LLKVATEKCEDERFRDSTEHLIIVAKK HHHHHHHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure TDIIREYYNKNSKNEWLRLNDPYNRLELFSTMYMIKEYFPQEGKILDIGSGPGRYSIEL HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHH LKRGYEVSLMDLSEKSIDMAKNNIESMGLKANDYICGDALYLDFIKDNTFDGILLMGPMY HHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEECCHHEEEEHHCCCCCCEEEECCHH HVKSREDRIRILENCMRILKPGGIILIAYINSLGVLKVGLSDFPQEYKDINKIYDLFDEK HHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHCC GFSQEESFTETYFTVPEKAISEVNEVGFNILSRAGAESFLSGQAFYMTKYYLEDKEIYFN CCCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHCHHHHHCCCEEEEEEEEECHHHHHHH LLKVATEKCEDERFRDSTEHLIIVAKK HHHHHHHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7513784; 8905232; 9278503; 8566713 [H]