Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311220

Identifier: 18311220

GI number: 18311220

Start: 2560233

End: 2561756

Strand: Reverse

Name: 18311220

Synonym: CPE2238

Alternate gene names: NA

Gene position: 2561756-2560233 (Counterclockwise)

Preceding gene: 18311221

Following gene: 18311218

Centisome position: 84.51

GC content: 27.49

Gene sequence:

>1524_bases
ATGAAGAAAATTTTTTTAGTCTTCTTTACTATTATTAGCTTTTTTATGATGGGATGTTCTCAAAAAGAATCTTTTGATAT
ATCTAAAATAACTCCACCAGAGTCAGATAATATAAAGATATTAGGGGAATGGGAAGTAGTAAGTAAGTTACATGATAGTG
ATGAAAATAATTCAGGTAGCGTAAGTGGTGCTTTTCACTTAGAGAAAGATGATATTGTTAATATAAGTAAGGATGGCGTA
GTTGCAAATGGAATTAGCATAGTTAATCCAAAGTTTAAGTTAAAGAGAATGGAGAGAGAGGTATTCTTTAGAGAAATAGA
TAATATATCAATAAAAAATGAAATAAAGGATGCAATAAAAAGTGAATATATAGATGTGAATTCTATATATGATAGTAATA
AAACATATTTAAGTATTATTTCAATTAATGATGATGAAGCGTATTTATTATTAACTGATAATCTTATTAAACTAAAAAAA
GTTTCTAATGTTGTTACAAAAGAAGAGATTAGTGAATCAGAGAAATCAGATGGCGATAAGAATACTAAAAGAGAAAATAC
TATAAGTCCAGAGTACTATCAAAAGGATGTAGGAATTTTACTTGGACTTAAGGAACCTGCACATATAGAAGATGACGATT
TTGAGGAAGCTTCTTATAAAACTTTATGGATTTCTGTAATTAATAATGAATTACAGCCAATAATGGTTTTAGATAATTCT
CTTTTATTACCAAGAATAAATGGATTCTCCAATATAAGTTTAAGTTCAACTTTAGATAATGGTAAATTTGAAAATAAACT
TAAGGTTACAAGTAAAAAGAAAGATCCTAATGATAAGACTGAAATAAAGGGTGAGAAAAATACTGAAGGAATATATGAAG
AAATAACCTTTGTAGGAAATGACTATATAGGATTAGAGTCTTATTCTGGAAGTGATGATTTTAGAGGTACTTTTAATGAG
TATAGTATAATTCCTATTAATACTATGGATACTCATAAGAGTATGGATATAGTAAATTTATTTGGAAAAGAACAAGAGGA
GAATTTTAATAAAAGTGAAAAGAATGCTATTCAAAAGTATGATATTGATGGAAGAGAGTATTATTCTAAAAATAAATACT
CAAATATAACTCTTCAAAGGAAAAATGGTAATTGGCATTTAGAAGGAATATTAAACGAAAAAAGTTCAATGGATTACCCT
AAAACTTTTGATATAAATATAAATCCAGTTCCTATATTAGTGAATTATGATACTTTGGCAGTTCCATGGAGTCAGGTTTT
ATCTCTTGGAAGAGAGGTTAGAGATGTTGTTACAGCACCAAATGGAAAAATAGCCATAACATTAGCTAAAGATAAGTTAT
CAATATATAAAGTTATTGATGGACGAATTGGAGAAAGATTAGGTGAAATAAATATAAATAACGATGAAAAGATTGTAATG
GCTGAATGGGCTGTAGGAGATTATGTAAAGTATTGGGATGAGACTGTTGAAAATGTATATGGTGCTAAGAAAATAAGTGA
ATAG

Upstream 100 bases:

>100_bases
TATAGTGAATTAGGTAATGGAACGAAAGTGGTTATATATTTACCTAAGAAATTAATCAGGAGTGTTGAGGATGATTTAAA
TTAATCAAAAGAGGTGTTTT

Downstream 100 bases:

>100_bases
AATATAATAATTTATTATTAAAGTATAAATATGGGACAGTAGATAGTTTGGTGTAAAAAACAAAACTATCTACTGTTTTT
TTAGTTTTAGGTCTCTAGAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKKIFLVFFTIISFFMMGCSQKESFDISKITPPESDNIKILGEWEVVSKLHDSDENNSGSVSGAFHLEKDDIVNISKDGV
VANGISIVNPKFKLKRMEREVFFREIDNISIKNEIKDAIKSEYIDVNSIYDSNKTYLSIISINDDEAYLLLTDNLIKLKK
VSNVVTKEEISESEKSDGDKNTKRENTISPEYYQKDVGILLGLKEPAHIEDDDFEEASYKTLWISVINNELQPIMVLDNS
LLLPRINGFSNISLSSTLDNGKFENKLKVTSKKKDPNDKTEIKGEKNTEGIYEEITFVGNDYIGLESYSGSDDFRGTFNE
YSIIPINTMDTHKSMDIVNLFGKEQEENFNKSEKNAIQKYDIDGREYYSKNKYSNITLQRKNGNWHLEGILNEKSSMDYP
KTFDININPVPILVNYDTLAVPWSQVLSLGREVRDVVTAPNGKIAITLAKDKLSIYKVIDGRIGERLGEININNDEKIVM
AEWAVGDYVKYWDETVENVYGAKKISE

Sequences:

>Translated_507_residues
MKKIFLVFFTIISFFMMGCSQKESFDISKITPPESDNIKILGEWEVVSKLHDSDENNSGSVSGAFHLEKDDIVNISKDGV
VANGISIVNPKFKLKRMEREVFFREIDNISIKNEIKDAIKSEYIDVNSIYDSNKTYLSIISINDDEAYLLLTDNLIKLKK
VSNVVTKEEISESEKSDGDKNTKRENTISPEYYQKDVGILLGLKEPAHIEDDDFEEASYKTLWISVINNELQPIMVLDNS
LLLPRINGFSNISLSSTLDNGKFENKLKVTSKKKDPNDKTEIKGEKNTEGIYEEITFVGNDYIGLESYSGSDDFRGTFNE
YSIIPINTMDTHKSMDIVNLFGKEQEENFNKSEKNAIQKYDIDGREYYSKNKYSNITLQRKNGNWHLEGILNEKSSMDYP
KTFDININPVPILVNYDTLAVPWSQVLSLGREVRDVVTAPNGKIAITLAKDKLSIYKVIDGRIGERLGEININNDEKIVM
AEWAVGDYVKYWDETVENVYGAKKISE
>Mature_507_residues
MKKIFLVFFTIISFFMMGCSQKESFDISKITPPESDNIKILGEWEVVSKLHDSDENNSGSVSGAFHLEKDDIVNISKDGV
VANGISIVNPKFKLKRMEREVFFREIDNISIKNEIKDAIKSEYIDVNSIYDSNKTYLSIISINDDEAYLLLTDNLIKLKK
VSNVVTKEEISESEKSDGDKNTKRENTISPEYYQKDVGILLGLKEPAHIEDDDFEEASYKTLWISVINNELQPIMVLDNS
LLLPRINGFSNISLSSTLDNGKFENKLKVTSKKKDPNDKTEIKGEKNTEGIYEEITFVGNDYIGLESYSGSDDFRGTFNE
YSIIPINTMDTHKSMDIVNLFGKEQEENFNKSEKNAIQKYDIDGREYYSKNKYSNITLQRKNGNWHLEGILNEKSSMDYP
KTFDININPVPILVNYDTLAVPWSQVLSLGREVRDVVTAPNGKIAITLAKDKLSIYKVIDGRIGERLGEININNDEKIVM
AEWAVGDYVKYWDETVENVYGAKKISE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57780; Mature: 57780

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFLVFFTIISFFMMGCSQKESFDISKITPPESDNIKILGEWEVVSKLHDSDENNSGS
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCC
VSGAFHLEKDDIVNISKDGVVANGISIVNPKFKLKRMEREVFFREIDNISIKNEIKDAIK
EEEEEEECCCCEEEECCCCEEECCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SEYIDVNSIYDSNKTYLSIISINDDEAYLLLTDNLIKLKKVSNVVTKEEISESEKSDGDK
HHCEEEEHEECCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
NTKRENTISPEYYQKDVGILLGLKEPAHIEDDDFEEASYKTLWISVINNELQPIMVLDNS
CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCC
LLLPRINGFSNISLSSTLDNGKFENKLKVTSKKKDPNDKTEIKGEKNTEGIYEEITFVGN
EEEEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCHHHHHEEECC
DYIGLESYSGSDDFRGTFNEYSIIPINTMDTHKSMDIVNLFGKEQEENFNKSEKNAIQKY
CEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHCCCCHHHHHHHEE
DIDGREYYSKNKYSNITLQRKNGNWHLEGILNEKSSMDYPKTFDININPVPILVNYDTLA
CCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCEE
VPWSQVLSLGREVRDVVTAPNGKIAITLAKDKLSIYKVIDGRIGERLGEININNDEKIVM
CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCHHHHHHCCEECCCCCEEEE
AEWAVGDYVKYWDETVENVYGAKKISE
EECCHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure
MKKIFLVFFTIISFFMMGCSQKESFDISKITPPESDNIKILGEWEVVSKLHDSDENNSGS
CCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCC
VSGAFHLEKDDIVNISKDGVVANGISIVNPKFKLKRMEREVFFREIDNISIKNEIKDAIK
EEEEEEECCCCEEEECCCCEEECCEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SEYIDVNSIYDSNKTYLSIISINDDEAYLLLTDNLIKLKKVSNVVTKEEISESEKSDGDK
HHCEEEEHEECCCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
NTKRENTISPEYYQKDVGILLGLKEPAHIEDDDFEEASYKTLWISVINNELQPIMVLDNS
CCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCC
LLLPRINGFSNISLSSTLDNGKFENKLKVTSKKKDPNDKTEIKGEKNTEGIYEEITFVGN
EEEEECCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCHHHHHEEECC
DYIGLESYSGSDDFRGTFNEYSIIPINTMDTHKSMDIVNLFGKEQEENFNKSEKNAIQKY
CEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCHHHCCCCHHHHHHHEE
DIDGREYYSKNKYSNITLQRKNGNWHLEGILNEKSSMDYPKTFDININPVPILVNYDTLA
CCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCEE
VPWSQVLSLGREVRDVVTAPNGKIAITLAKDKLSIYKVIDGRIGERLGEININNDEKIVM
CCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCHHHHHHCCEECCCCCEEEE
AEWAVGDYVKYWDETVENVYGAKKISE
EECCHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA