Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311218

Identifier: 18311218

GI number: 18311218

Start: 2557451

End: 2558023

Strand: Reverse

Name: 18311218

Synonym: CPE2236

Alternate gene names: NA

Gene position: 2558023-2557451 (Counterclockwise)

Preceding gene: 18311220

Following gene: 18311217

Centisome position: 84.38

GC content: 28.1

Gene sequence:

>573_bases
ATGAAAAAAATAGATTGTTTAGGTATGGCTTGTCCAATGCCAGTTATAAATACAAAAAAATATTTTGATTCAATAGAAGA
AGGGGTTGCAGAAGTATTAGTTGATAATGAAGTAGCAAAAAATAATATCTGTAAGTATGCAGAAGGATGTGGATATAATT
TTGATGCTTCAGAAAAAGAGGGAAATTATATAATTAAAATAGAAAAAAATGGTGAGAATAAAATAGAAAAGAAGGAAGAT
GACTTTGTAATAGTAGTAGGTACTGATAAGTTAGGTCAAGGTAATGATGATTTAGGTACTATACTTATGAAAGGATACCT
ATATACCTTATCAGAAAGTGATATCATACCTAAGGAACTTATATTCTTAAATGGTGGAGTTAAGCTTACTGTTAAAGGAT
CAGAAGTTTTAGAATCATTACAAAACTTAGAAAAGCGTGGAGTTAAGATACTAAGTTGTGGAACTTGCTTAGATTTTTAT
GGAATAAAAGATGATTTAGCTATAGGAGAAATAAGCAATATGTACACTATAGTTGAATCTATGAATACTTCTAATAAGGT
AATAAAGTTATAA

Upstream 100 bases:

>100_bases
CAAAAAAGTTTAAAAAGAACTTTTTTAGAATAACTTTGATTTTCTCAATTTACAAAAATGTGATATCTTTATAATATAGA
TTATTTTAAGAGGTGAGGTC

Downstream 100 bases:

>100_bases
TACTTTTGAGAGGAGAAAATATTTTTAGAGTATGGAGAATATTTTATGTGAGTATGATGTTGTAGTTGTTGGTGGCGGAA
TAAGTGGAATGGCAGCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: SirA Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; SirA-Like Protein; Transcriptional Regulator; Cytoplasmic Protein; Redox Protein; Selenium Metabolism Protein Yedf; SirA-Like

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKKIDCLGMACPMPVINTKKYFDSIEEGVAEVLVDNEVAKNNICKYAEGCGYNFDASEKEGNYIIKIEKNGENKIEKKED
DFVIVVGTDKLGQGNDDLGTILMKGYLYTLSESDIIPKELIFLNGGVKLTVKGSEVLESLQNLEKRGVKILSCGTCLDFY
GIKDDLAIGEISNMYTIVESMNTSNKVIKL

Sequences:

>Translated_190_residues
MKKIDCLGMACPMPVINTKKYFDSIEEGVAEVLVDNEVAKNNICKYAEGCGYNFDASEKEGNYIIKIEKNGENKIEKKED
DFVIVVGTDKLGQGNDDLGTILMKGYLYTLSESDIIPKELIFLNGGVKLTVKGSEVLESLQNLEKRGVKILSCGTCLDFY
GIKDDLAIGEISNMYTIVESMNTSNKVIKL
>Mature_190_residues
MKKIDCLGMACPMPVINTKKYFDSIEEGVAEVLVDNEVAKNNICKYAEGCGYNFDASEKEGNYIIKIEKNGENKIEKKED
DFVIVVGTDKLGQGNDDLGTILMKGYLYTLSESDIIPKELIFLNGGVKLTVKGSEVLESLQNLEKRGVKILSCGTCLDFY
GIKDDLAIGEISNMYTIVESMNTSNKVIKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21001; Mature: 21001

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDCLGMACPMPVINTKKYFDSIEEGVAEVLVDNEVAKNNICKYAEGCGYNFDASEKE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCC
GNYIIKIEKNGENKIEKKEDDFVIVVGTDKLGQGNDDLGTILMKGYLYTLSESDIIPKEL
CCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCEEEEECCCCCCCHHE
IFLNGGVKLTVKGSEVLESLQNLEKRGVKILSCGTCLDFYGIKDDLAIGEISNMYTIVES
EEECCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHH
MNTSNKVIKL
CCCCCCEEEC
>Mature Secondary Structure
MKKIDCLGMACPMPVINTKKYFDSIEEGVAEVLVDNEVAKNNICKYAEGCGYNFDASEKE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCCCCCCCC
GNYIIKIEKNGENKIEKKEDDFVIVVGTDKLGQGNDDLGTILMKGYLYTLSESDIIPKEL
CCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCEEEEECCCCCCCHHE
IFLNGGVKLTVKGSEVLESLQNLEKRGVKILSCGTCLDFYGIKDDLAIGEISNMYTIVES
EEECCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHH
MNTSNKVIKL
CCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA