Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is cotS [H]

Identifier: 18311204

GI number: 18311204

Start: 2544187

End: 2545194

Strand: Reverse

Name: cotS [H]

Synonym: CPE2222

Alternate gene names: 18311204

Gene position: 2545194-2544187 (Counterclockwise)

Preceding gene: 18311206

Following gene: 18311203

Centisome position: 83.96

GC content: 27.88

Gene sequence:

>1008_bases
ATGGAACATGATTATATAAAGGATAAAATCTTACTTAACTATGGTATAGAAGTCAAAGAAGTAATAAAAGTGAAAAACAC
ATATAAAATTATAACCAGTGATGAGGAGTATTGTTTGAAGGTAATAAAGTATCAATATCCTCATTTTTATTTTATAGTTT
CTGCTCAAAAGCATCTTATGAAAAATGGCTTTAATTCAATTCCTAAAATATTAGATACTATTGATGGAAAAGATTATGTA
AGGCTAGATGATAAATTAGCTTATTTAACTCCTTGGGTAAAATGTAGAGAATGTGATTATAAAAATAAGTGGGATTTAAG
CTTAGCAGCGAAAAAGCTTAGTGAACTACATAATAGTAGTGAAGGGTTTGTTATAAATAGAGATCTTAAGCCTAGAATAG
CATGGGGTAAGTGGTATAAGATCTTTGAGACAAGGGGAGAAGAAATTCTTGATTTTAAAAAAAGAATATATCAGAAAGCA
TATATGTCAGACTTTGATAAGTTATATCTTTCTATTATGGATGAGGAGTTAAAAAGAGTTGAAAGAACACTTTCTCATAT
AAAAACTAGTGGATATTTTGACTATATGAAAAAGGAAGTTAAAAAATTAGGCTTTTGTCATCATGATTATGCAAATCATA
ATGTGCTTTTATTAGAAAATAATGAAATAAATATAATAGACTTTGATTACTGTATTTTAGATTCTCACTTACATGATTTA
AGTAGCCTATGCATTAGAACAATGAAAGAGGGGAGATGGGACTTAAATTTATTTAAATATATAATAGAGAGTTATTCAAA
GAATAAAGAAGTAAGAAATGAAGAGTTTCCTATTATAGCTTCTTTTATTGAATTCCCTCAAGCTTATTGGCAACTAGGAC
TTCAATATTATTGGGAACAACAGCCTTGGGAAGAAGAACATTTTTTAAAGAAACTAGGTAAATACGAAAAAGATAGAGAG
TTTAGACAGAACTTTGTTGATGAATTAAGCAATTTTACTTTGAGGTGA

Upstream 100 bases:

>100_bases
ATTATAATTAATAATATTAATAAATAATATAAAATGTGCATGTAACAAGAAGAATTTAAGGAACATATACTAATTAAAAA
GTGACAGTAGGAGTAAGTTT

Downstream 100 bases:

>100_bases
TTTAAATTTGAGTGAAAAATTAGAATTGTTTTTAAGAGAAAATAATATAGAGGTATTACCTAGAAAAGAAATAGAAAGAG
AAAAAAGAGAATTAAGATTT

Product: spore coat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV
RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA
YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL
SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE
FRQNFVDELSNFTLR

Sequences:

>Translated_335_residues
MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV
RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA
YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL
SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE
FRQNFVDELSNFTLR
>Mature_335_residues
MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLMKNGFNSIPKILDTIDGKDYV
RLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSSEGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKA
YMSDFDKLYLSIMDEELKRVERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL
SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQQPWEEEHFLKKLGKYEKDRE
FRQNFVDELSNFTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall, spore coat [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CotS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009
- InterPro:   IPR014255 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 40631; Mature: 40631

Theoretical pI: Translated: 7.32; Mature: 7.32

Prosite motif: PS00109 PROTEIN_KINASE_TYR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLM
CCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEHHHHHHH
KNGFNSIPKILDTIDGKDYVRLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSS
HCCHHHHHHHHHHCCCCCEEEECCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCC
EGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKAYMSDFDKLYLSIMDEELKRV
CCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH
SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQ
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
QPWEEEHFLKKLGKYEKDREFRQNFVDELSNFTLR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEHDYIKDKILLNYGIEVKEVIKVKNTYKIITSDEEYCLKVIKYQYPHFYFIVSAQKHLM
CCCCHHHHHHHHHCCCCHHHHHHHHCCEEEEECCHHHHHHHHHHCCCEEEEEEHHHHHHH
KNGFNSIPKILDTIDGKDYVRLDDKLAYLTPWVKCRECDYKNKWDLSLAAKKLSELHNSS
HCCHHHHHHHHHHCCCCCEEEECCCHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCC
EGFVINRDLKPRIAWGKWYKIFETRGEEILDFKKRIYQKAYMSDFDKLYLSIMDEELKRV
CCEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERTLSHIKTSGYFDYMKKEVKKLGFCHHDYANHNVLLLENNEINIIDFDYCILDSHLHDL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHH
SSLCIRTMKEGRWDLNLFKYIIESYSKNKEVRNEEFPIIASFIEFPQAYWQLGLQYYWEQ
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
QPWEEEHFLKKLGKYEKDREFRQNFVDELSNFTLR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7545510; 9387221; 9384377 [H]