Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is 18311192

Identifier: 18311192

GI number: 18311192

Start: 2530353

End: 2531333

Strand: Reverse

Name: 18311192

Synonym: CPE2210

Alternate gene names: NA

Gene position: 2531333-2530353 (Counterclockwise)

Preceding gene: 18311193

Following gene: 18311191

Centisome position: 83.5

GC content: 30.07

Gene sequence:

>981_bases
ATGACTAGAGCATTAGCCATGGTTTCAGGTGGATTAGATAGTATATTAGCTGCAAAGTTAATAAAGGATCAAGGAATAGA
GGTAATAGGAATCTGTTTTAAATCTTATTTCTTTAATGAAGAGAATGCAAAGAGAATGTGTAAACAAATAGATATGCCTT
TAGAGGTAGTAGATTTTTCAGAAGAACATTTTGAAATGGTTAAGGACCCTAAACATGGTAGAGGAAAAAATATGAACCCA
TGTATAGATTGTCATGCAATGATGATGAGATATTCAGGAGAATTATTAAAAAAGTTTGACGCTGACTTTATAATAACTGG
TGAAGTTTTAAATCAAAGACCAATGTCTCAAAATAGACAAGCATTAAATACTGTTAAAAAAGAATCAGGATTTAGTGAAA
AAATCTTAAGACCATTATGTGCTTTAAACTTAGAGCCTACAGAGATGGAGTTAAATGGCTTAGTAGATAGAGAAAAATTA
TTAAAAATATCAGGTAGAAGTAGAAAGACTCAAATGGAGCTTGCTGAAAAGTGGAATATAGTTGATTATCCATCACCAGC
AGGAGGATGTAAATTAACAGAGCCTGGATATGCAATAAGATTAAGTGATTTACTTGATAATCAAGAAACAGTAGCTAAGG
ATGAAATTGAAGTTCTTAAGTATGGTAGACATATGAGAATATCACCAAAAAATAAAGTTATAGTAGCTAGAAATGGTGAA
GAGTGGAAAGAAATAGTTAAGTTTAAAAGAGAAGATGATATTTTAGTAACATCTAAAAATTCTACTGGGGCTCCTGTTAT
ATTAAGAGGAGAATTTAATCAAGAAGATTTAGAAACTGCTGCTAGAATATGCGGAAGATATTGTAAAGAAAAAGATAGCG
ACGCTGTTGAAATAAATTATGAGAAAAATGGAGAGATTAATACAATAACAATAACTCCATTTAAAGATGAAGAACTTAAA
AAATATATGATAAATCAATAA

Upstream 100 bases:

>100_bases
TAAAAAGGAAAATAACGTAAATTTTGAATTTAAGGTAATTGATTTATTTAAATAAAAGAATTAACATATGATAATAAAGT
GATTTTTAGGAGGAAAAAAT

Downstream 100 bases:

>100_bases
TTGATTTAGAAAGGATATTATTATGAGTAAAAAAGCTATAATATCAATATGTAGCACTCAAGATATTGGAGAAAAAGAAA
AAATAGAAGTTGTAACTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Thiamine Biosynthesis Protein-Like Protein; tRNA Methyl Transferase-Like Protein; ThiI Family Protein; Arginino Succinate Synthase; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MTRALAMVSGGLDSILAAKLIKDQGIEVIGICFKSYFFNEENAKRMCKQIDMPLEVVDFSEEHFEMVKDPKHGRGKNMNP
CIDCHAMMMRYSGELLKKFDADFIITGEVLNQRPMSQNRQALNTVKKESGFSEKILRPLCALNLEPTEMELNGLVDREKL
LKISGRSRKTQMELAEKWNIVDYPSPAGGCKLTEPGYAIRLSDLLDNQETVAKDEIEVLKYGRHMRISPKNKVIVARNGE
EWKEIVKFKREDDILVTSKNSTGAPVILRGEFNQEDLETAARICGRYCKEKDSDAVEINYEKNGEINTITITPFKDEELK
KYMINQ

Sequences:

>Translated_326_residues
MTRALAMVSGGLDSILAAKLIKDQGIEVIGICFKSYFFNEENAKRMCKQIDMPLEVVDFSEEHFEMVKDPKHGRGKNMNP
CIDCHAMMMRYSGELLKKFDADFIITGEVLNQRPMSQNRQALNTVKKESGFSEKILRPLCALNLEPTEMELNGLVDREKL
LKISGRSRKTQMELAEKWNIVDYPSPAGGCKLTEPGYAIRLSDLLDNQETVAKDEIEVLKYGRHMRISPKNKVIVARNGE
EWKEIVKFKREDDILVTSKNSTGAPVILRGEFNQEDLETAARICGRYCKEKDSDAVEINYEKNGEINTITITPFKDEELK
KYMINQ
>Mature_325_residues
TRALAMVSGGLDSILAAKLIKDQGIEVIGICFKSYFFNEENAKRMCKQIDMPLEVVDFSEEHFEMVKDPKHGRGKNMNPC
IDCHAMMMRYSGELLKKFDADFIITGEVLNQRPMSQNRQALNTVKKESGFSEKILRPLCALNLEPTEMELNGLVDREKLL
KISGRSRKTQMELAEKWNIVDYPSPAGGCKLTEPGYAIRLSDLLDNQETVAKDEIEVLKYGRHMRISPKNKVIVARNGEE
WKEIVKFKREDDILVTSKNSTGAPVILRGEFNQEDLETAARICGRYCKEKDSDAVEINYEKNGEINTITITPFKDEELKK
YMINQ

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37199; Mature: 37068

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRALAMVSGGLDSILAAKLIKDQGIEVIGICFKSYFFNEENAKRMCKQIDMPLEVVDFS
CCCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC
EEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEVLNQRPMSQNRQ
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHH
ALNTVKKESGFSEKILRPLCALNLEPTEMELNGLVDREKLLKISGRSRKTQMELAEKWNI
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCC
VDYPSPAGGCKLTEPGYAIRLSDLLDNQETVAKDEIEVLKYGRHMRISPKNKVIVARNGE
CCCCCCCCCCEECCCCCEEEEHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCH
EWKEIVKFKREDDILVTSKNSTGAPVILRGEFNQEDLETAARICGRYCKEKDSDAVEINY
HHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
EKNGEINTITITPFKDEELKKYMINQ
CCCCCEEEEEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
TRALAMVSGGLDSILAAKLIKDQGIEVIGICFKSYFFNEENAKRMCKQIDMPLEVVDFS
CCHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEECCC
EEHFEMVKDPKHGRGKNMNPCIDCHAMMMRYSGELLKKFDADFIITGEVLNQRPMSQNRQ
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHCCCCCHHHHH
ALNTVKKESGFSEKILRPLCALNLEPTEMELNGLVDREKLLKISGRSRKTQMELAEKWNI
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHCCC
VDYPSPAGGCKLTEPGYAIRLSDLLDNQETVAKDEIEVLKYGRHMRISPKNKVIVARNGE
CCCCCCCCCCEECCCCCEEEEHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCH
EWKEIVKFKREDDILVTSKNSTGAPVILRGEFNQEDLETAARICGRYCKEKDSDAVEINY
HHHHHHHHCCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEE
EKNGEINTITITPFKDEELKKYMINQ
CCCCCEEEEEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA