Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311191

Identifier: 18311191

GI number: 18311191

Start: 2529911

End: 2530330

Strand: Reverse

Name: 18311191

Synonym: CPE2209

Alternate gene names: NA

Gene position: 2530330-2529911 (Counterclockwise)

Preceding gene: 18311192

Following gene: 18311190

Centisome position: 83.47

GC content: 29.05

Gene sequence:

>420_bases
ATGAGTAAAAAAGCTATAATATCAATATGTAGCACTCAAGATATTGGAGAAAAAGAAAAAATAGAAGTTGTAACTGTTGG
AGAATTTTCTATTAATGGAGATGAATTTATAGCTACTTATGATGAAACTGAAATATCAGGAATGGAAGGAACAAAAACAA
CTCTAAAAATAAAGGGCGATAAAGTTGTATTACATAGAGAAGGAACAACTAGTACAAAGATGGAATTCCAAAAGGATAAT
ACACAAGTGGCTCTTTATAATACTCCTTATGGAATGTTAGAGCTTAAGACATCAACAAAAGAGTTAGATTTAGATGTTAA
TGAAAAGGGAGGAAACATCTCTATAAAATATCATCTAATAGCTGGTGGACAAGAACCTATAAAAACAAATCTTGATATGA
AAATAAAAGTAGAAGATTAA

Upstream 100 bases:

>100_bases
AAAAATGGAGAGATTAATACAATAACAATAACTCCATTTAAAGATGAAGAACTTAAAAAATATATGATAAATCAATAATT
GATTTAGAAAGGATATTATT

Downstream 100 bases:

>100_bases
TCTTCAAATAAAAAATAAGGCTATACCAAAAGGGGTAGCCTTATTTTTATAAATTATTTATTTTTAAAATAAAAAAAGTT
GAAACTAATTTCAACTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSKKAIISICSTQDIGEKEKIEVVTVGEFSINGDEFIATYDETEISGMEGTKTTLKIKGDKVVLHREGTTSTKMEFQKDN
TQVALYNTPYGMLELKTSTKELDLDVNEKGGNISIKYHLIAGGQEPIKTNLDMKIKVED

Sequences:

>Translated_139_residues
MSKKAIISICSTQDIGEKEKIEVVTVGEFSINGDEFIATYDETEISGMEGTKTTLKIKGDKVVLHREGTTSTKMEFQKDN
TQVALYNTPYGMLELKTSTKELDLDVNEKGGNISIKYHLIAGGQEPIKTNLDMKIKVED
>Mature_138_residues
SKKAIISICSTQDIGEKEKIEVVTVGEFSINGDEFIATYDETEISGMEGTKTTLKIKGDKVVLHREGTTSTKMEFQKDNT
QVALYNTPYGMLELKTSTKELDLDVNEKGGNISIKYHLIAGGQEPIKTNLDMKIKVED

Specific function: Unknown

COG id: COG4506

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15423; Mature: 15292

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKAIISICSTQDIGEKEKIEVVTVGEFSINGDEFIATYDETEISGMEGTKTTLKIKGD
CCCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCEECCCCCCEEEEEECCC
KVVLHREGTTSTKMEFQKDNTQVALYNTPYGMLELKTSTKELDLDVNEKGGNISIKYHLI
EEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEECCCCCEEEEEEEEE
AGGQEPIKTNLDMKIKVED
ECCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
SKKAIISICSTQDIGEKEKIEVVTVGEFSINGDEFIATYDETEISGMEGTKTTLKIKGD
CCCEEEEEECCCCCCCCCEEEEEEEEEEEECCCEEEEEECCCEECCCCCCEEEEEECCC
KVVLHREGTTSTKMEFQKDNTQVALYNTPYGMLELKTSTKELDLDVNEKGGNISIKYHLI
EEEEEECCCCCCEEEEECCCCEEEEEECCCCEEEEECCCEEEEEEECCCCCEEEEEEEEE
AGGQEPIKTNLDMKIKVED
ECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA