| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is pyrG
Identifier: 18311190
GI number: 18311190
Start: 2527964
End: 2529571
Strand: Reverse
Name: pyrG
Synonym: CPE2208
Alternate gene names: 18311190
Gene position: 2529571-2527964 (Counterclockwise)
Preceding gene: 18311191
Following gene: 18311189
Centisome position: 83.44
GC content: 33.83
Gene sequence:
>1608_bases ATGAGCAAAAATACTAAGTATGTATTTGTAACAGGTGGAGTTGTTTCTTCATTAGGAAAAGGAATAACAGCTGCTTCATT AGGAAGATTATTAAAAAACAGAGGATTAAGTGTAAGTATTCAAAAATTTGATCCATACCTAAACATTGACCCAGGTACAA TGAGCCCATACCAACATGGAGAAGTTTTCGTAACTGATGATGGTGCTGAAACAGACTTAGACTTAGGTCACTATGAAAGA TTCATAGATGAAAACTTAACTCAAAACTCAAACGTTACTTCAGGTAGAGTTTACTGGTCAGTAATATCAAAAGAGAGAAA AGGTGAATACTTAGGAGGTACTGTACAAGTTATACCTCACATAACTAATGCTATAAAAGATAGAGTACATAGAGTAGGAA AAGAAAGAGATGTAGATGTAGTAATCACTGAGATCGGTGGAACAATAGGTGATATCGAATCATTACCTTTCTTAGAAGCT ATAAGACAAATCAAATATGATGTAGGTAAAGAAAATGTTTGTTTCATACATGTTACATTAGTACCTTACTTAGGAAAAGC TGGTGAGTTAAAAACAAAACCAACTCAACACTCAGTTAAAGAGTTAAGAAGTATAGGAATTCAACCAGACATAATAGTTT GTAGATCAGAAAAAGAATTATCAGAAGATATCAAAAAGAAAATCGGATTATTCTGTAATATAGATGCAAGCGAAGTTATT CAAAACTTAGATGCAGAGCATTTATACGCTGTTCCTCTAATGTTACACAAAGAAGGATTAGATAGATTAGTTTGTGAAAA ATTAGGTCTTGGATGCAGAGACATAGATAATGCTGAATGGATAGACATGGTTCATAGAATAACTCACTTAACTCATACAA CTAAGATTGCTTTAGTTGGTAAATATGTTGAGTTACATGATGCATACATATCAGTAGTTGAAGCTTTAAATCATGGTGGA TTAAGCAATGACACTAATGTTGAAATAGAGTGGATAAATGCTGAGGATGTAACTAAAGAAAATGTTGATGAATTATTAAG TGGAGTAGATGGAGTTCTAGTTCCAGGTGGATTCGGAGACAGAGGAGTAGAAGGAAAAATCGAAGCTATAAGATGGGCTA GAGAAAACAAGAAACCATTCTTAGGAATATGCTTAGGAATGCAATGTGCTGTTATAGAATACGCTAGAAACGTATTAGGA TTAGAAGGAGCTCATTCATCAGAGTTAAATCCAGAAACTCCATTCCCAGTAATCGACTTAATGCCTGAGCAAAAAGATGT TGAGGATTTAGGTGGAACAATGAGATTAGGATTATATCCATGTAAATTAGAAGACAATACATTCTGTAAGGATGTTTATG CTTCAGATTTAATCTACGAAAGACATAGACATAGATATGAGTTCAACAATGAGTACAGAACTCAATTAATAGAAAGCGGA TTAACTATAGCTGGTACTTCACCAGATGGAAGATTAGTTGAGTGTGTAGAAGTTAAGGATCATCCTTGGTTCGTAGCAGT TCAATATCATCCAGAGTTAAAATCAAGACCAAACAGACCTCACCCATTATTCGTAGGATTTGTTGGTGCTGCATTAAACA ATAAATAA
Upstream 100 bases:
>100_bases TAAAACAAGCAATAAAAAACCCATTCTAAATGAGGTAATTATCATTATAAATGAAATAAAGAACGATGTCAAGAATAAAT TTACATTAGGAGGAAGAGAT
Downstream 100 bases:
>100_bases TTTTAGAAATATTAAGGATATCTAACTTAAATGTTAGGTGTCCTTTTTTTATTTAATAATATTAGAAATAAAATCTTATA AAAATATACTATATATAGAT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MSKNTKYVFVTGGVVSSLGKGITAASLGRLLKNRGLSVSIQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYER FIDENLTQNSNVTSGRVYWSVISKERKGEYLGGTVQVIPHITNAIKDRVHRVGKERDVDVVITEIGGTIGDIESLPFLEA IRQIKYDVGKENVCFIHVTLVPYLGKAGELKTKPTQHSVKELRSIGIQPDIIVCRSEKELSEDIKKKIGLFCNIDASEVI QNLDAEHLYAVPLMLHKEGLDRLVCEKLGLGCRDIDNAEWIDMVHRITHLTHTTKIALVGKYVELHDAYISVVEALNHGG LSNDTNVEIEWINAEDVTKENVDELLSGVDGVLVPGGFGDRGVEGKIEAIRWARENKKPFLGICLGMQCAVIEYARNVLG LEGAHSSELNPETPFPVIDLMPEQKDVEDLGGTMRLGLYPCKLEDNTFCKDVYASDLIYERHRHRYEFNNEYRTQLIESG LTIAGTSPDGRLVECVEVKDHPWFVAVQYHPELKSRPNRPHPLFVGFVGAALNNK
Sequences:
>Translated_535_residues MSKNTKYVFVTGGVVSSLGKGITAASLGRLLKNRGLSVSIQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYER FIDENLTQNSNVTSGRVYWSVISKERKGEYLGGTVQVIPHITNAIKDRVHRVGKERDVDVVITEIGGTIGDIESLPFLEA IRQIKYDVGKENVCFIHVTLVPYLGKAGELKTKPTQHSVKELRSIGIQPDIIVCRSEKELSEDIKKKIGLFCNIDASEVI QNLDAEHLYAVPLMLHKEGLDRLVCEKLGLGCRDIDNAEWIDMVHRITHLTHTTKIALVGKYVELHDAYISVVEALNHGG LSNDTNVEIEWINAEDVTKENVDELLSGVDGVLVPGGFGDRGVEGKIEAIRWARENKKPFLGICLGMQCAVIEYARNVLG LEGAHSSELNPETPFPVIDLMPEQKDVEDLGGTMRLGLYPCKLEDNTFCKDVYASDLIYERHRHRYEFNNEYRTQLIESG LTIAGTSPDGRLVECVEVKDHPWFVAVQYHPELKSRPNRPHPLFVGFVGAALNNK >Mature_534_residues SKNTKYVFVTGGVVSSLGKGITAASLGRLLKNRGLSVSIQKFDPYLNIDPGTMSPYQHGEVFVTDDGAETDLDLGHYERF IDENLTQNSNVTSGRVYWSVISKERKGEYLGGTVQVIPHITNAIKDRVHRVGKERDVDVVITEIGGTIGDIESLPFLEAI RQIKYDVGKENVCFIHVTLVPYLGKAGELKTKPTQHSVKELRSIGIQPDIIVCRSEKELSEDIKKKIGLFCNIDASEVIQ NLDAEHLYAVPLMLHKEGLDRLVCEKLGLGCRDIDNAEWIDMVHRITHLTHTTKIALVGKYVELHDAYISVVEALNHGGL SNDTNVEIEWINAEDVTKENVDELLSGVDGVLVPGGFGDRGVEGKIEAIRWARENKKPFLGICLGMQCAVIEYARNVLGL EGAHSSELNPETPFPVIDLMPEQKDVEDLGGTMRLGLYPCKLEDNTFCKDVYASDLIYERHRHRYEFNNEYRTQLIESGL TIAGTSPDGRLVECVEVKDHPWFVAVQYHPELKSRPNRPHPLFVGFVGAALNNK
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=47.9128856624319, Blast_Score=511, Evalue=1e-145, Organism=Homo sapiens, GI28559085, Length=550, Percent_Identity=46.1818181818182, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI28559083, Length=550, Percent_Identity=46.1818181818182, Blast_Score=498, Evalue=1e-141, Organism=Homo sapiens, GI221316689, Length=550, Percent_Identity=46.1818181818182, Blast_Score=498, Evalue=1e-141, Organism=Escherichia coli, GI1789142, Length=538, Percent_Identity=55.5762081784387, Blast_Score=599, Evalue=1e-172, Organism=Caenorhabditis elegans, GI25148299, Length=604, Percent_Identity=39.5695364238411, Blast_Score=421, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=44.8028673835125, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322563, Length=560, Percent_Identity=45, Blast_Score=469, Evalue=1e-133, Organism=Drosophila melanogaster, GI24664469, Length=552, Percent_Identity=47.2826086956522, Blast_Score=497, Evalue=1e-140, Organism=Drosophila melanogaster, GI21357815, Length=498, Percent_Identity=45.5823293172691, Blast_Score=424, Evalue=1e-119,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CLOP1 (Q0TNA4)
Other databases:
- EMBL: CP000246 - RefSeq: YP_696886.1 - ProteinModelPortal: Q0TNA4 - SMR: Q0TNA4 - STRING: Q0TNA4 - GeneID: 4203868 - GenomeReviews: CP000246_GR - KEGG: cpf:CPF_2472 - TIGR: CPF_2472 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: CPER195103:CPF_2472-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59657; Mature: 59525
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 384-384 ACT_SITE 510-510 ACT_SITE 512-512
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNTKYVFVTGGVVSSLGKGITAASLGRLLKNRGLSVSIQKFDPYLNIDPGTMSPYQHG CCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCC EVFVTDDGAETDLDLGHYERFIDENLTQNSNVTSGRVYWSVISKERKGEYLGGTVQVIPH EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHH ITNAIKDRVHRVGKERDVDVVITEIGGTIGDIESLPFLEAIRQIKYDVGKENVCFIHVTL HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYLGKAGELKTKPTQHSVKELRSIGIQPDIIVCRSEKELSEDIKKKIGLFCNIDASEVI ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCEEEECCHHHHH QNLDAEHLYAVPLMLHKEGLDRLVCEKLGLGCRDIDNAEWIDMVHRITHLTHTTKIALVG HHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE KYVELHDAYISVVEALNHGGLSNDTNVEIEWINAEDVTKENVDELLSGVDGVLVPGGFGD HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCC RGVEGKIEAIRWARENKKPFLGICLGMQCAVIEYARNVLGLEGAHSSELNPETPFPVIDL CCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC MPEQKDVEDLGGTMRLGLYPCKLEDNTFCKDVYASDLIYERHRHRYEFNNEYRTQLIESG CCCCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC LTIAGTSPDGRLVECVEVKDHPWFVAVQYHPELKSRPNRPHPLFVGFVGAALNNK CEEEECCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCCEEEEEECHHCCCC >Mature Secondary Structure SKNTKYVFVTGGVVSSLGKGITAASLGRLLKNRGLSVSIQKFDPYLNIDPGTMSPYQHG CCCCCEEEEECHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCCCCCC EVFVTDDGAETDLDLGHYERFIDENLTQNSNVTSGRVYWSVISKERKGEYLGGTVQVIPH EEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCCCCHHHHHHH ITNAIKDRVHRVGKERDVDVVITEIGGTIGDIESLPFLEAIRQIKYDVGKENVCFIHVTL HHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEE VPYLGKAGELKTKPTQHSVKELRSIGIQPDIIVCRSEKELSEDIKKKIGLFCNIDASEVI ECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCEEEECCHHHHH QNLDAEHLYAVPLMLHKEGLDRLVCEKLGLGCRDIDNAEWIDMVHRITHLTHTTKIALVG HHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEE KYVELHDAYISVVEALNHGGLSNDTNVEIEWINAEDVTKENVDELLSGVDGVLVPGGFGD HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEEECCCCCC RGVEGKIEAIRWARENKKPFLGICLGMQCAVIEYARNVLGLEGAHSSELNPETPFPVIDL CCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEC MPEQKDVEDLGGTMRLGLYPCKLEDNTFCKDVYASDLIYERHRHRYEFNNEYRTQLIESG CCCCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC LTIAGTSPDGRLVECVEVKDHPWFVAVQYHPELKSRPNRPHPLFVGFVGAALNNK CEEEECCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCCEEEEEECHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA