Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18309905

Identifier: 18309905

GI number: 18309905

Start: 1122654

End: 1123067

Strand: Direct

Name: 18309905

Synonym: CPE0923

Alternate gene names: NA

Gene position: 1122654-1123067 (Clockwise)

Preceding gene: 18309904

Following gene: 18309906

Centisome position: 37.03

GC content: 28.02

Gene sequence:

>414_bases
ATGGAAAAGTCAAATGTATTTTCCAATGATGAAATAATAAGATGTACCGTGTGTGGCAAAGATTTAATGGAAGATATAAA
AATGTCTATGGTACAAATAATAACTGATGAGAATGATGAAATAGTGAGGGTTATTCCTTGTTGCAAGGGAAAATGCGATC
AGATTTTACAAGATGAGATTAAAGAGTCAGAAGGAAATGGATTTAGAGACTTAATAACCTTTGTAAATCCATATTTATAT
ATAAATAATATTATGCAGATGATGGATAGGATGTTTGAAGGAAAAGGCTTTGCAAACCAAGAAGCTTTTAATGCATATTC
AGATTTAATATTAAATTGTTATCAATATGTATCAAGAAATTTAAGTGAAGAGGAAAAGGAATTTTCTAAGAATATAAGCT
TATTACCATTATAA

Upstream 100 bases:

>100_bases
CTTGTTATGAAGATAACATCAATGAAGAAAATACAATTTATAAAATAAATAAATTGTTAGCTGATATGAATTGATTATAA
ACAAAGGAGATGTAAATATT

Downstream 100 bases:

>100_bases
TGTTTTTAATATTTTTATAGTTTATTTTAGTTGTTTTTAGTATAAAGGCAGTTTGAGATACAAGAGGAGTGAGTAAATTG
AGAATAACTACATTAGTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY
INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL

Sequences:

>Translated_137_residues
MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY
INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL
>Mature_137_residues
MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY
INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15907; Mature: 15907

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEI
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
KESEGNGFRDLITFVNPYLYINNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LSEEEKEFSKNISLLPL
CCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEI
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
KESEGNGFRDLITFVNPYLYINNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRN
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
LSEEEKEFSKNISLLPL
CCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA