Definition | Clostridium perfringens str. 13, complete genome. |
---|---|
Accession | NC_003366 |
Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is 18309905
Identifier: 18309905
GI number: 18309905
Start: 1122654
End: 1123067
Strand: Direct
Name: 18309905
Synonym: CPE0923
Alternate gene names: NA
Gene position: 1122654-1123067 (Clockwise)
Preceding gene: 18309904
Following gene: 18309906
Centisome position: 37.03
GC content: 28.02
Gene sequence:
>414_bases ATGGAAAAGTCAAATGTATTTTCCAATGATGAAATAATAAGATGTACCGTGTGTGGCAAAGATTTAATGGAAGATATAAA AATGTCTATGGTACAAATAATAACTGATGAGAATGATGAAATAGTGAGGGTTATTCCTTGTTGCAAGGGAAAATGCGATC AGATTTTACAAGATGAGATTAAAGAGTCAGAAGGAAATGGATTTAGAGACTTAATAACCTTTGTAAATCCATATTTATAT ATAAATAATATTATGCAGATGATGGATAGGATGTTTGAAGGAAAAGGCTTTGCAAACCAAGAAGCTTTTAATGCATATTC AGATTTAATATTAAATTGTTATCAATATGTATCAAGAAATTTAAGTGAAGAGGAAAAGGAATTTTCTAAGAATATAAGCT TATTACCATTATAA
Upstream 100 bases:
>100_bases CTTGTTATGAAGATAACATCAATGAAGAAAATACAATTTATAAAATAAATAAATTGTTAGCTGATATGAATTGATTATAA ACAAAGGAGATGTAAATATT
Downstream 100 bases:
>100_bases TGTTTTTAATATTTTTATAGTTTATTTTAGTTGTTTTTAGTATAAAGGCAGTTTGAGATACAAGAGGAGTGAGTAAATTG AGAATAACTACATTAGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL
Sequences:
>Translated_137_residues MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL >Mature_137_residues MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEIKESEGNGFRDLITFVNPYLY INNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRNLSEEEKEFSKNISLLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15907; Mature: 15907
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 10.2 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 10.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEI CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH KESEGNGFRDLITFVNPYLYINNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRN HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC LSEEEKEFSKNISLLPL CCHHHHHHHCCCCCCCC >Mature Secondary Structure MEKSNVFSNDEIIRCTVCGKDLMEDIKMSMVQIITDENDEIVRVIPCCKGKCDQILQDEI CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH KESEGNGFRDLITFVNPYLYINNIMQMMDRMFEGKGFANQEAFNAYSDLILNCYQYVSRN HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC LSEEEKEFSKNISLLPL CCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA