Definition | Clostridium perfringens str. 13, complete genome. |
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Accession | NC_003366 |
Length | 3,031,430 |
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The map label for this gene is 18309904
Identifier: 18309904
GI number: 18309904
Start: 1122001
End: 1122627
Strand: Direct
Name: 18309904
Synonym: CPE0922
Alternate gene names: NA
Gene position: 1122001-1122627 (Clockwise)
Preceding gene: 18309903
Following gene: 18309905
Centisome position: 37.01
GC content: 25.52
Gene sequence:
>627_bases ATGGTTTTTACAATTAATGCTTATAAAATACCTTTAGAGTCAGTTTATAGACTGAAGAAAAATAATAATTGGGAGCCACA AGAGCACTTTTTAACTATTGATTTTGAAAATGATATGATATTTAACACACATGAAGAAGCTGAAAAATGGCTTGCTGATA ATAATATTCTTTTTATAAATGATGAAAAGGTCAATACTTCAGAATTTCAGTTAAATTGCTATGGTGTTGAGAACTTTAAT ATTGAAATAGTAGTACATAGAAAAACAAAGCCTAATATTTTTACTGAAAAAGACGTAAGGAAAGTTTTAAACGAGGGCGA TGATAGATATAATAATTCCTTAATAATAGACTTTGAAGGCAATTTAAAGTTAATACAAAGTAATCCAGAAGATATAATAT ATCATTCTAACTATGCTGTTAGCAATGAAGTTTATAATAGCGGAAATGGATTTGTTGGAAGAGAATTTAGCGACTTGTAT ATTAAATATATTTATTTAAACTTGTTAGATAATTGGGTTTTACATTTAGAATCAGGAAGAAGTATTTATGTAACTTGTTA TGAAGATAACATCAATGAAGAAAATACAATTTATAAAATAAATAAATTGTTAGCTGATATGAATTGA
Upstream 100 bases:
>100_bases TTATATGGTATGTAAATGTGTACAAAAGGTTAATAGAATGATATAATTAAAATGTAATTATTTGGTTTTGTTTTTATATT TAATGACTAGGGGTGAGGAT
Downstream 100 bases:
>100_bases TTATAAACAAAGGAGATGTAAATATTATGGAAAAGTCAAATGTATTTTCCAATGATGAAATAATAAGATGTACCGTGTGT GGCAAAGATTTAATGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MVFTINAYKIPLESVYRLKKNNNWEPQEHFLTIDFENDMIFNTHEEAEKWLADNNILFINDEKVNTSEFQLNCYGVENFN IEIVVHRKTKPNIFTEKDVRKVLNEGDDRYNNSLIIDFEGNLKLIQSNPEDIIYHSNYAVSNEVYNSGNGFVGREFSDLY IKYIYLNLLDNWVLHLESGRSIYVTCYEDNINEENTIYKINKLLADMN
Sequences:
>Translated_208_residues MVFTINAYKIPLESVYRLKKNNNWEPQEHFLTIDFENDMIFNTHEEAEKWLADNNILFINDEKVNTSEFQLNCYGVENFN IEIVVHRKTKPNIFTEKDVRKVLNEGDDRYNNSLIIDFEGNLKLIQSNPEDIIYHSNYAVSNEVYNSGNGFVGREFSDLY IKYIYLNLLDNWVLHLESGRSIYVTCYEDNINEENTIYKINKLLADMN >Mature_208_residues MVFTINAYKIPLESVYRLKKNNNWEPQEHFLTIDFENDMIFNTHEEAEKWLADNNILFINDEKVNTSEFQLNCYGVENFN IEIVVHRKTKPNIFTEKDVRKVLNEGDDRYNNSLIIDFEGNLKLIQSNPEDIIYHSNYAVSNEVYNSGNGFVGREFSDLY IKYIYLNLLDNWVLHLESGRSIYVTCYEDNINEENTIYKINKLLADMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24633; Mature: 24633
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFTINAYKIPLESVYRLKKNNNWEPQEHFLTIDFENDMIFNTHEEAEKWLADNNILFIN CEEEEEEEECCHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHCCCCEEEEE DEKVNTSEFQLNCYGVENFNIEIVVHRKTKPNIFTEKDVRKVLNEGDDRYNNSLIIDFEG CCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC NLKLIQSNPEDIIYHSNYAVSNEVYNSGNGFVGREFSDLYIKYIYLNLLDNWVLHLESGR CEEEEECCCCCEEEECCEEECCCEEECCCCCCCCCHHHHEEEHHHEEHHCCEEEEEECCC SIYVTCYEDNINEENTIYKINKLLADMN EEEEEEEECCCCCCCCEEEEEHHHHCCC >Mature Secondary Structure MVFTINAYKIPLESVYRLKKNNNWEPQEHFLTIDFENDMIFNTHEEAEKWLADNNILFIN CEEEEEEEECCHHHHHHHHCCCCCCCCCEEEEEEECCCEEECCHHHHHHHHCCCCEEEEE DEKVNTSEFQLNCYGVENFNIEIVVHRKTKPNIFTEKDVRKVLNEGDDRYNNSLIIDFEG CCCCCCCEEEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC NLKLIQSNPEDIIYHSNYAVSNEVYNSGNGFVGREFSDLYIKYIYLNLLDNWVLHLESGR CEEEEECCCCCEEEECCEEECCCEEECCCCCCCCCHHHHEEEHHHEEHHCCEEEEEECCC SIYVTCYEDNINEENTIYKINKLLADMN EEEEEEEECCCCCCCCEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA