Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682693
Identifier: 182682693
GI number: 182682693
Start: 2480871
End: 2481419
Strand: Reverse
Name: 182682693
Synonym: XfasM23_2184
Alternate gene names: NA
Gene position: 2481419-2480871 (Counterclockwise)
Preceding gene: 182682698
Following gene: 182682691
Centisome position: 97.86
GC content: 60.84
Gene sequence:
>549_bases GTGGGTGTGTCTGGTGTCGTGTGTCTGCCACAGGACACATGCAGTGCCGCAGGCCGGATGCATCGTGGTGTTGTCTGCGT TGTGATGCAGCATGGGGATGGCGAAGGCGATGCGTTGTCGGTGAGCGCGTTGGGTCAGTGCAGTGCGTGTCATGAGGGGG CTGGCCTTGCGTTTCCTTGCGTGTTGGGATCGGTGTCTGTATCGGCACCGCGGGCGCGGATTCATGTGTGCACTGCGGAC ACGGTGCGTTGTCTACACAGATGCAGGGCGGTGTGGCTCGCGTCATTGATACACGGTGTCCTTGGTCACGCCCAGGGGGT GGGCGATCTGGGCGATGCAAATGCACGGTGCTGTGGTCATGGGGGGCATGGGAAGCATCTGCGACGGATCACGCCGGGTG AGAGTCTAGCAGTGGAACGTTGCGTTCCCAAACGTGGGTGCAGGGCGCAGCAGTGGGTGAATCGCAGCATCGTGCGTCAT TGTGAGTGGTTCAATGCGCTACATCACTTGGTGCAATGCAAGCATTCGCCGGTGGCGTGGTGTGCATGA
Upstream 100 bases:
>100_bases GATGCTTGGGCGGCGCGTCTTCCCGTGGTCGGGTGCTGTCAGCGCAATGCGGTTGCCAGCGCTTGTGGTGGTATCGGCTG TGGCTGGGTAAGGTTGTGCC
Downstream 100 bases:
>100_bases CGTTGTGCCACGCGCTGCGGGTGTGGTTGTAGCAATCGGCTGATGAGTGCTGCGGACACGACACCTGCGATTGGGCCAAC GAAATTCAGGCAGATCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGVSGVVCLPQDTCSAAGRMHRGVVCVVMQHGDGEGDALSVSALGQCSACHEGAGLAFPCVLGSVSVSAPRARIHVCTAD TVRCLHRCRAVWLASLIHGVLGHAQGVGDLGDANARCCGHGGHGKHLRRITPGESLAVERCVPKRGCRAQQWVNRSIVRH CEWFNALHHLVQCKHSPVAWCA
Sequences:
>Translated_182_residues MGVSGVVCLPQDTCSAAGRMHRGVVCVVMQHGDGEGDALSVSALGQCSACHEGAGLAFPCVLGSVSVSAPRARIHVCTAD TVRCLHRCRAVWLASLIHGVLGHAQGVGDLGDANARCCGHGGHGKHLRRITPGESLAVERCVPKRGCRAQQWVNRSIVRH CEWFNALHHLVQCKHSPVAWCA >Mature_181_residues GVSGVVCLPQDTCSAAGRMHRGVVCVVMQHGDGEGDALSVSALGQCSACHEGAGLAFPCVLGSVSVSAPRARIHVCTADT VRCLHRCRAVWLASLIHGVLGHAQGVGDLGDANARCCGHGGHGKHLRRITPGESLAVERCVPKRGCRAQQWVNRSIVRHC EWFNALHHLVQCKHSPVAWCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19250; Mature: 19119
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 8.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVSGVVCLPQDTCSAAGRMHRGVVCVVMQHGDGEGDALSVSALGQCSACHEGAGLAFPC CCCCCEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEHHHCCCCHHHCCCCCCCHHH VLGSVSVSAPRARIHVCTADTVRCLHRCRAVWLASLIHGVLGHAQGVGDLGDANARCCGH HHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC GGHGKHLRRITPGESLAVERCVPKRGCRAQQWVNRSIVRHCEWFNALHHLVQCKHSPVAW CCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CA CC >Mature Secondary Structure GVSGVVCLPQDTCSAAGRMHRGVVCVVMQHGDGEGDALSVSALGQCSACHEGAGLAFPC CCCCEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCEEEHHHCCCCHHHCCCCCCCHHH VLGSVSVSAPRARIHVCTADTVRCLHRCRAVWLASLIHGVLGHAQGVGDLGDANARCCGH HHCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC GGHGKHLRRITPGESLAVERCVPKRGCRAQQWVNRSIVRHCEWFNALHHLVQCKHSPVAW CCCCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC CA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA