| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682648
Identifier: 182682648
GI number: 182682648
Start: 2408531
End: 2408800
Strand: Direct
Name: 182682648
Synonym: XfasM23_2138
Alternate gene names: NA
Gene position: 2408531-2408800 (Clockwise)
Preceding gene: 182682642
Following gene: 182682650
Centisome position: 94.99
GC content: 49.63
Gene sequence:
>270_bases ATGGATCGCAAATTACTTCATTTGCTGTGCTCCCCAGATACCCGCCAACCGCTGTCCTTACTTGAGAGTAAAGGGCTGGA AGCCCTGAACAAGGCGATCGTTAGTGGCACTGTGCAACGCGCCGACGGCAGCATTCAAAATCAGTCATTACATGAAGCGC TGATCACTCGTGATCGCAAACAAGTGTTCCGAATTGAAGACAGTATCCCCGTCTTATTGCCCGAGGAAGCTATCGCTACG ATACAGATCGCCAACTTCCCGGATAAATAA
Upstream 100 bases:
>100_bases ACAATACCGACCAGCGGGGGGGATTGATTGGAGATCATGGCCCTAACCTATCGCAAACGCGTATTCTAGCCATCTTCCCG GTTAAGATCAGACATTCATT
Downstream 100 bases:
>100_bases AGCACCTCCATCACGACAATTAAAACACTCTCACTGCGGATGGATAGCTTTGAAGAAACCGTCGCACCTCCCTCTTCATC CGGCACTCCTCCCACTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIAT IQIANFPDK
Sequences:
>Translated_89_residues MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIAT IQIANFPDK >Mature_89_residues MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIAT IQIANFPDK
Specific function: Unknown
COG id: COG2835
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9917; Mature: 9917
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRK CCCHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QVFRIEDSIPVLLPEEAIATIQIANFPDK HHHHHCCCCCEEECCCCEEEEEECCCCCC >Mature Secondary Structure MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRK CCCHHEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH QVFRIEDSIPVLLPEEAIATIQIANFPDK HHHHHCCCCCEEECCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA