| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682642
Identifier: 182682642
GI number: 182682642
Start: 2403456
End: 2404055
Strand: Direct
Name: 182682642
Synonym: XfasM23_2132
Alternate gene names: NA
Gene position: 2403456-2404055 (Clockwise)
Preceding gene: 182682641
Following gene: 182682648
Centisome position: 94.79
GC content: 45.83
Gene sequence:
>600_bases GTGTGTGACGATTCAAACTTCTCTGCGATTCGATGTTCTGGGGGTAAAACAGAGATTAGCTTCAGCGGTGCGCAGCATCT TTCCATTGCACTACGTGATATCGAATACACGAAAATATATAGCGCACTCGCAGATAAGCGCTCATACAACATGAGGCTTA TTGATGGGGCACTGCTTCAAATGATGTACCGCCTCGAAAACGACAGCCTGCTCCAACATCGGCTTGGGTTTTACCCTGCG CCACATCTACGGACCTTCCAAGATGACCCGGACACATACGTTTGCGATGCGCTGTTTATGGAGATTGTGGAACGTAGAAT TGTTCCATTCCCATTACGTTTTGATTTTGATGCGCGCGAAGGTATTTACGTTGATGGGGCGCATCCCAAAAGTCATCTGA CATTAGGTGATGTCACGGGATGCCGCATTCCAGTGTCAGCACCATTGACACCGCGTTGGTTTGTTGAATTTGTTTTGAGG CATTTTTATCAAACAAAGCAGCATGATTTCATCAGCGGTCTGCCACAACACAGCATGAAATTTCAACCATCAATCACTCA ACATGAAGCAGATTTGATGCATCTGGTGATTCCATATTAG
Upstream 100 bases:
>100_bases CACTCAGAAAATTCCTTGGGGATAACGCCTCATGAGGCTGACTCCACAATGCATCAAAAAAGATATGGATTGACTGATTT CTAAATTAATTGAACAAGGC
Downstream 100 bases:
>100_bases CCATCGCGCAGCAGCAGTGATCGGCAGTCAATAAAGCACATCACAACGCATTACTGCGGCAATCAAGTTAATGACCAAAG AACCCACACACGAAATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MCDDSNFSAIRCSGGKTEISFSGAQHLSIALRDIEYTKIYSALADKRSYNMRLIDGALLQMMYRLENDSLLQHRLGFYPA PHLRTFQDDPDTYVCDALFMEIVERRIVPFPLRFDFDAREGIYVDGAHPKSHLTLGDVTGCRIPVSAPLTPRWFVEFVLR HFYQTKQHDFISGLPQHSMKFQPSITQHEADLMHLVIPY
Sequences:
>Translated_199_residues MCDDSNFSAIRCSGGKTEISFSGAQHLSIALRDIEYTKIYSALADKRSYNMRLIDGALLQMMYRLENDSLLQHRLGFYPA PHLRTFQDDPDTYVCDALFMEIVERRIVPFPLRFDFDAREGIYVDGAHPKSHLTLGDVTGCRIPVSAPLTPRWFVEFVLR HFYQTKQHDFISGLPQHSMKFQPSITQHEADLMHLVIPY >Mature_199_residues MCDDSNFSAIRCSGGKTEISFSGAQHLSIALRDIEYTKIYSALADKRSYNMRLIDGALLQMMYRLENDSLLQHRLGFYPA PHLRTFQDDPDTYVCDALFMEIVERRIVPFPLRFDFDAREGIYVDGAHPKSHLTLGDVTGCRIPVSAPLTPRWFVEFVLR HFYQTKQHDFISGLPQHSMKFQPSITQHEADLMHLVIPY
Specific function: Unknown
COG id: COG5619
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22959; Mature: 22959
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDDSNFSAIRCSGGKTEISFSGAQHLSIALRDIEYTKIYSALADKRSYNMRLIDGALLQ CCCCCCCCEEEECCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHH MMYRLENDSLLQHRLGFYPAPHLRTFQDDPDTYVCDALFMEIVERRIVPFPLRFDFDARE HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC GIYVDGAHPKSHLTLGDVTGCRIPVSAPLTPRWFVEFVLRHFYQTKQHDFISGLPQHSMK CEEEECCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCEE FQPSITQHEADLMHLVIPY CCCCCCHHCCCEEEEEECC >Mature Secondary Structure MCDDSNFSAIRCSGGKTEISFSGAQHLSIALRDIEYTKIYSALADKRSYNMRLIDGALLQ CCCCCCCCEEEECCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCEEEHHHHHHH MMYRLENDSLLQHRLGFYPAPHLRTFQDDPDTYVCDALFMEIVERRIVPFPLRFDFDARE HHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCC GIYVDGAHPKSHLTLGDVTGCRIPVSAPLTPRWFVEFVLRHFYQTKQHDFISGLPQHSMK CEEEECCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCEE FQPSITQHEADLMHLVIPY CCCCCCHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA