| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682650
Identifier: 182682650
GI number: 182682650
Start: 2409452
End: 2410423
Strand: Direct
Name: 182682650
Synonym: XfasM23_2140
Alternate gene names: NA
Gene position: 2409452-2410423 (Clockwise)
Preceding gene: 182682648
Following gene: 182682659
Centisome position: 95.02
GC content: 55.35
Gene sequence:
>972_bases ATGCATCTAATGCCGATACTCATCGTGTTCTGGCTAGGCACTTCCCAAGCCCTGGCGGTCGAAGTCTGCGAATTGCCGCC GGTTAACGGCTCTTCTGCTGCAGCACAAGCCATCGTACGCACTGCCTGTGAGGAACATCGACTATGGGGACAATCATTCA TCAATCGTCACGGACGCATCGCCAAGCTTGGCATCACAGAATCTGAAAGCGACACGCTCGCCGATCAAAAATCCATTGCT TGGCAACAAGTAGCGCTTTACTGGCGTGAGAGCAGCACCCTAGCGATGACGGGCAGCGCGCCAGGATCCTCTAGCTGTGC CGCGCTAGACAACAGCCGCAACACTGCCAACGATTGCCGCGCATTCCTGCTTGACACCCCCTGGTCAGCAGCGTTTATAT CCTGGGTCATGACTCGCGTTGGTCTCGCTGGGTTCAGCGTCTCACCATCTCACATCACCTACATTCGCGCCAGTTATCTT GATGCTTCCTCGCCATACCGTTTCACCGACCCAGGCATTGAGAAGCCAAAAGCCGGAGACCTGCTATGCCGGATACGCGG ACGTCCGCCCGTCGGCTATGCCGGCTTACGTGCCGCGCTAGACGCTGGTAGAACCGAGGATTGGCTCAGTCACTGCGATA TTGTGGTCGCTGCAAACGTCAACGGCGATCGCACGCTCCACATGATTGGCGGCAACGTGTCCAATACGGTGATGATGCGC AAACTGCCGTTGGATCGCAAAGGACGGCTGCAACTGTCACGACTACAACCGAATCAGGATCAGGAATGCACCCCAGCGCA AGAAAATAACTGTAATTCCAACCGAGGCGACTGGGCAGCGCTATTGAAACTGCGTCCTGACGTAGCACTGGCACCACCTG ATAGCCAAACAGACACTCCCCTCCCTGTAGCACAGTGTTGCACCAATGAATACACACTCTGCCTACAATTCCCTGCACAA GAAATAGACTAA
Upstream 100 bases:
>100_bases AACTGAGACCATCAACGAGATCAAAGATAATCACAAAATGATTCAGTCAATCTGTTTGCGTCTCATCCATCCAAGAGGAT CGATACCTGTCTCCACGTTG
Downstream 100 bases:
>100_bases AAATTATGGAAGAACAATGAGATCAATGGCAACCGCGACTGTGCTTGAGTGATCTGCAGCAAATAATATCCAACAAAATA TTTCATCTGAAAAATAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MHLMPILIVFWLGTSQALAVEVCELPPVNGSSAAAQAIVRTACEEHRLWGQSFINRHGRIAKLGITESESDTLADQKSIA WQQVALYWRESSTLAMTGSAPGSSSCAALDNSRNTANDCRAFLLDTPWSAAFISWVMTRVGLAGFSVSPSHITYIRASYL DASSPYRFTDPGIEKPKAGDLLCRIRGRPPVGYAGLRAALDAGRTEDWLSHCDIVVAANVNGDRTLHMIGGNVSNTVMMR KLPLDRKGRLQLSRLQPNQDQECTPAQENNCNSNRGDWAALLKLRPDVALAPPDSQTDTPLPVAQCCTNEYTLCLQFPAQ EID
Sequences:
>Translated_323_residues MHLMPILIVFWLGTSQALAVEVCELPPVNGSSAAAQAIVRTACEEHRLWGQSFINRHGRIAKLGITESESDTLADQKSIA WQQVALYWRESSTLAMTGSAPGSSSCAALDNSRNTANDCRAFLLDTPWSAAFISWVMTRVGLAGFSVSPSHITYIRASYL DASSPYRFTDPGIEKPKAGDLLCRIRGRPPVGYAGLRAALDAGRTEDWLSHCDIVVAANVNGDRTLHMIGGNVSNTVMMR KLPLDRKGRLQLSRLQPNQDQECTPAQENNCNSNRGDWAALLKLRPDVALAPPDSQTDTPLPVAQCCTNEYTLCLQFPAQ EID >Mature_323_residues MHLMPILIVFWLGTSQALAVEVCELPPVNGSSAAAQAIVRTACEEHRLWGQSFINRHGRIAKLGITESESDTLADQKSIA WQQVALYWRESSTLAMTGSAPGSSSCAALDNSRNTANDCRAFLLDTPWSAAFISWVMTRVGLAGFSVSPSHITYIRASYL DASSPYRFTDPGIEKPKAGDLLCRIRGRPPVGYAGLRAALDAGRTEDWLSHCDIVVAANVNGDRTLHMIGGNVSNTVMMR KLPLDRKGRLQLSRLQPNQDQECTPAQENNCNSNRGDWAALLKLRPDVALAPPDSQTDTPLPVAQCCTNEYTLCLQFPAQ EID
Specific function: Unknown
COG id: COG4322
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35256; Mature: 35256
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLMPILIVFWLGTSQALAVEVCELPPVNGSSAAAQAIVRTACEEHRLWGQSFINRHGRI CCHHHEEHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE AKLGITESESDTLADQKSIAWQQVALYWRESSTLAMTGSAPGSSSCAALDNSRNTANDCR EEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCEECCCCCCCHHHHE AFLLDTPWSAAFISWVMTRVGLAGFSVSPSHITYIRASYLDASSPYRFTDPGIEKPKAGD EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCC LLCRIRGRPPVGYAGLRAALDAGRTEDWLSHCDIVVAANVNGDRTLHMIGGNVSNTVMMR EEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEE KLPLDRKGRLQLSRLQPNQDQECTPAQENNCNSNRGDWAALLKLRPDVALAPPDSQTDTP ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCC LPVAQCCTNEYTLCLQFPAQEID CCHHHHCCCCCEEEEECCHHHCC >Mature Secondary Structure MHLMPILIVFWLGTSQALAVEVCELPPVNGSSAAAQAIVRTACEEHRLWGQSFINRHGRI CCHHHEEHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE AKLGITESESDTLADQKSIAWQQVALYWRESSTLAMTGSAPGSSSCAALDNSRNTANDCR EEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCCCEECCCCCCCHHHHE AFLLDTPWSAAFISWVMTRVGLAGFSVSPSHITYIRASYLDASSPYRFTDPGIEKPKAGD EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCC LLCRIRGRPPVGYAGLRAALDAGRTEDWLSHCDIVVAANVNGDRTLHMIGGNVSNTVMMR EEEEECCCCCCCHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCEEEEE KLPLDRKGRLQLSRLQPNQDQECTPAQENNCNSNRGDWAALLKLRPDVALAPPDSQTDTP ECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCC LPVAQCCTNEYTLCLQFPAQEID CCHHHHCCCCCEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA