| Definition | Xylella fastidiosa M23 chromosome, complete genome. |
|---|---|
| Accession | NC_010577 |
| Length | 2,535,690 |
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The map label for this gene is 182682641
Identifier: 182682641
GI number: 182682641
Start: 2400331
End: 2401038
Strand: Direct
Name: 182682641
Synonym: XfasM23_2129
Alternate gene names: NA
Gene position: 2400331-2401038 (Clockwise)
Preceding gene: 182682639
Following gene: 182682642
Centisome position: 94.66
GC content: 53.53
Gene sequence:
>708_bases ATGGATCCACTGCATGACCCTCGCAACGTGGCCCAGATCACACCGACGACCGGCAATATTGCTCCGTCTGATGCGCTTGA GAGACCCCCACTGCAACCGACGTGTCTCACCCAACCAAACCCATCTCGGCAACAACACTACGGAAACACCTGTCCTCAAG CATTCGAAATAACGCCCTCTCGCATGGCTCACAGCGCTCATGTCCACAGCACCCTTACAAAGCAGCGCAGGCGTCTGAGC TTGCCCAAGAGTCACGCTTTAAATTCAATACGAGACCGCACCACATCCAAACAACGGTGCAGAACAGACACCACGATCAG AAAAACCGCACAATCACTCGCCAACAAACACACCCAGAAAGAATGCCGAAAAAACCCCACAATCATCCACAATACAGCTG CCGTCTCTCCAGACAGCCGCCATCCCCTATTCCAAGCAGCTCTCTTGGGGACACAACAGGACACATGGCTAGCACCCGAT ACAAGCACAAGACAAGAACAAGGCTGCAACACCGCCCCGCATAGATCAGCAACCCGGGTTTCTTGGTTTCTCAGAACACT GCATGGAGATTCGTTTGTCTTCCCAAAGCACGACACCCATTACGCATCGACCAAAGTTGAGCAGCACAGCAAGCCAGCGC GTATTTCTGGGTTCCGCCTGGTCAACATCACGCGCAACTTCGGAACATCACAGATGCAAGCCGCATGA
Upstream 100 bases:
>100_bases TTCAGTGTCCATTGATGCAGGCTGCACCTAGCCATGCCTTCTATGAAACACTCCTTGCACACTTGATAACAGCCACAAGC GCTGCAATCGGACATTTCTA
Downstream 100 bases:
>100_bases CTCACCATCGCTACCCACGGCCAGTTCCGTACCTCTCAACCCACCCTGGATCATCAGCACATCCAAGACCTCGACACCCG TTTCCGATACCGGCCTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MDPLHDPRNVAQITPTTGNIAPSDALERPPLQPTCLTQPNPSRQQHYGNTCPQAFEITPSRMAHSAHVHSTLTKQRRRLS LPKSHALNSIRDRTTSKQRCRTDTTIRKTAQSLANKHTQKECRKNPTIIHNTAAVSPDSRHPLFQAALLGTQQDTWLAPD TSTRQEQGCNTAPHRSATRVSWFLRTLHGDSFVFPKHDTHYASTKVEQHSKPARISGFRLVNITRNFGTSQMQAA
Sequences:
>Translated_235_residues MDPLHDPRNVAQITPTTGNIAPSDALERPPLQPTCLTQPNPSRQQHYGNTCPQAFEITPSRMAHSAHVHSTLTKQRRRLS LPKSHALNSIRDRTTSKQRCRTDTTIRKTAQSLANKHTQKECRKNPTIIHNTAAVSPDSRHPLFQAALLGTQQDTWLAPD TSTRQEQGCNTAPHRSATRVSWFLRTLHGDSFVFPKHDTHYASTKVEQHSKPARISGFRLVNITRNFGTSQMQAA >Mature_235_residues MDPLHDPRNVAQITPTTGNIAPSDALERPPLQPTCLTQPNPSRQQHYGNTCPQAFEITPSRMAHSAHVHSTLTKQRRRLS LPKSHALNSIRDRTTSKQRCRTDTTIRKTAQSLANKHTQKECRKNPTIIHNTAAVSPDSRHPLFQAALLGTQQDTWLAPD TSTRQEQGCNTAPHRSATRVSWFLRTLHGDSFVFPKHDTHYASTKVEQHSKPARISGFRLVNITRNFGTSQMQAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26359; Mature: 26359
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLHDPRNVAQITPTTGNIAPSDALERPPLQPTCLTQPNPSRQQHYGNTCPQAFEITPS CCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCHH RMAHSAHVHSTLTKQRRRLSLPKSHALNSIRDRTTSKQRCRTDTTIRKTAQSLANKHTQK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ECRKNPTIIHNTAAVSPDSRHPLFQAALLGTQQDTWLAPDTSTRQEQGCNTAPHRSATRV HHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCCHHHH SWFLRTLHGDSFVFPKHDTHYASTKVEQHSKPARISGFRLVNITRNFGTSQMQAA HHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCC >Mature Secondary Structure MDPLHDPRNVAQITPTTGNIAPSDALERPPLQPTCLTQPNPSRQQHYGNTCPQAFEITPS CCCCCCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEECCHH RMAHSAHVHSTLTKQRRRLSLPKSHALNSIRDRTTSKQRCRTDTTIRKTAQSLANKHTQK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ECRKNPTIIHNTAAVSPDSRHPLFQAALLGTQQDTWLAPDTSTRQEQGCNTAPHRSATRV HHHCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCEECCCCCCHHHCCCCCCCCCCHHHH SWFLRTLHGDSFVFPKHDTHYASTKVEQHSKPARISGFRLVNITRNFGTSQMQAA HHHHHHHCCCCEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA