Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682553
Identifier: 182682553
GI number: 182682553
Start: 2286320
End: 2288821
Strand: Reverse
Name: 182682553
Synonym: XfasM23_2041
Alternate gene names: NA
Gene position: 2288821-2286320 (Counterclockwise)
Preceding gene: 182682554
Following gene: 182682552
Centisome position: 90.26
GC content: 58.27
Gene sequence:
>2502_bases ATGCCCTCCCGTAGAGACCTCTGCTCCACACTGCTGATCCTTGTGATGACGGCCTCCTTCGGCGTCATCCCTGCCTTTGC TGACTACCGTACCCCCCCAGAGCACATCCTCAAAGTGCTCAAAGCACCACTGACACCAACACCGAGCCTGGACCCCACCG GCCACCGTCTTCTCTTGACCACTCAGCAGACCTATCCTTCCATTACCCGTGTTGCCCAACCCTATTTGAAACTGGCCGGC GTGCGCCTGGAACCTCGTAACCGCAGCCGCCACGACACCCCCGGTGGCTACGGTATTCCATCTTGCGTTGCCCACTTCTC CCTGATCGAGATTGTCGGCGGTCGCGAGATCCCCGTTCAGCTCCCTCCCGGAGCCTGTCCCGGCATGGCCTTGTGGTCCC CCGATGGCCAGCGCTTCGTCTTCCAAAACGTTACATCCGACTCCGTTGAATTGTGGATTGGCGATGCCGCCACCGGCCAC ATACGCCACATACCCGGCATACGTCTCAACCCCATTTTTGGACATACGGTCCAATGGCTTGGCGGCAGCAGCAAACTCCT CCTCAAACTCGTGCCCCCTCATCAGGGATTACCGCCGGCCAACACTCCCGGCACCGCTGGTCCGGATATTCAAGAAACCT TCGGCGGCAAAGGCCAGAGCAGCACCTATGAAACTCGCGACACCCTTGCCAGCATTTACGATGATTCCTTATTCGCCTAC TACGGCGCCTCCCAATTGGCGGTACTTGATATTGGAACCGGCGTCCTACGTCCCGTTGGAGTTCCCGCCTTGTACGACAG CGTCAAAGGTGCTCCTGACGGCCTACATGTATTGACTGTCGCCATTCAACCCCCGTACTCCCATGCCGTCACTTACCAGC GTTTCGCCCGTGACATCGCCGTACTTGACCTCGTCAAAAATGCCTCCGCACCGATCGCCCGTCTGCCATTGGCGGACCGC GTCCCCGTGCATGGCGTCCCCGAAGGCCCGCGCGACTTCGACTGGCGCCCCACTGATCCGGCCACCTTGGTATGGGCTGA GGCCCAGGATCATGGCGACTGGAACATCAACGTCCCGCACCGTGACCACCTCATGCTGTTGCAAGCTCCCTTCACCACCA AACCCGTTGAGATTGCACGTACCGTACAACGCTTCGATGGCTTTGACTGGACCGCACAGCCAGATATTGCCTTCCTCAGT GAAGAAGATGAGAACCGTCACTGGCGCCGCACCCGTATTGTTGACCTTGACCACCCAGCCCATCCCGAACGCATCTTGTG GGATCTTTCCAGCGATGAACGCTATGCAGACCCAGGCGCGTTTATCTACCACCTCCTGCCCAACGGCACCTCCGTCGTAC GCCAGGATGGTCATGCCGTCTACCTGAGAGGGCAGGGCGCCTCCCCACAGGGCGACCGCCCTTTCTTAGACCGCCTGGAC CTGAAAACACTCAAGACCCAACGCCTATTCCGCAGCAACAGCGACGCCTACGAACAGTTACTTGGCTTTGTTCCCGAACC CGGAAAATTCCTCACCTGGCACCAAACCGTCATCGACCCCCCTAACGCCTTCCTACGCACCCTCGGTCCCCAGCACCCAA CCCCTGCCCAGAGCGAACCCGACTATGCCTCCAGCACCGCCCGCATTACCCATATCACCGATCCGACCCCCGAAGTGCGT CAGATCAAAAAACGCCTTGTGACCTATAAACGTAATGATGGCGTCGACCTTTCCTTCACCCTCTATACTCCCCCCGACTA TCAAGAAGGCCAACGCCTACCGGCCATCCTTTACGCCTATCCCGCTGACTTTGCCAACAGCACCCAGGCTGGCCAAGTCA CCGGTTCCCAACACACCTTCACCCGCTTACCCTACTACCGACTGCTCCTCCTGGCCGGCTACGCCATCATCGACAACGCA TCCTTCCCCATCGTTGGCGACCCCAAAACCGCCTACGATACTTACCTCGAACAACTCAAAGCCGATGCCACGGCCGCTGT AGACAAAGCCGTCGCCTTGGGCGTCGTCGACCGTGAGCGCATCGGCATCACCGGACACAGCCACGGTGCCCTCATGACAG CCAACTTGATCGCCCATACCGACCTGTTTCGTGCTGGAGTGGCCACCAGCGGCTCATACAACAAAACCTTCACCCCCTTT GGCTTCCAGAACGAACGCCGCATCCTTTGGCAAGCCAAAGACGTCTACTTGAAAGCATCGCCCTTCTTCTATGCCGACAA AATCAAACACCCATTACTCCTGATCCATGGCGAAGATGACGCCAACCCTGGCACCGAACCATTCCAATCCCGCAAGTTCT ACCAAGCAATCCGCGGCAATGGCGGTATTGCCAAACTGGTCATGCTGCCCCATGAACCACATTGGTATACCGCCTTGGAA TCGAACCAACAGGTCGTCTACGAAATGCTCAATTGGTTTGATACCCACGTCAAACAGGCCCCCCGTAAACCTGAATCACC GCCCTTGATACCTCCCCATTGA
Upstream 100 bases:
>100_bases TCATGTTCAGCGAACCATCCCTGTTGCAACCCGTTTGCTGCGTGTCGCATCCCTTGCCACGTCTTCAGCGTTTCAATTCA TGATCCTAAGGACAATCGCT
Downstream 100 bases:
>100_bases GTGACCTGCTATCCCTTGGGCAACGCTCGATCAATCCAAACCTTCGAACGTTTCCAGCCCTTCCAAGCAAACCTTGCAGC GTACTGATTCCGGTACGCTG
Product: peptidase S9 prolyl oligopeptidase
Products: NA
Alternate protein names: Glutamyl Peptidase; Peptidase S9A/B/C Family Catalytic Domain Protein; Aminoacyl Peptidase; Prolyl Oligopeptidase; Acylamino-Acid-Releasing; Acylaminoacyl-Peptidase; Exported Oligopeptidase; Prolyl Oligopeptidase Family Protein; Secreted Protein
Number of amino acids: Translated: 833; Mature: 832
Protein sequence:
>833_residues MPSRRDLCSTLLILVMTASFGVIPAFADYRTPPEHILKVLKAPLTPTPSLDPTGHRLLLTTQQTYPSITRVAQPYLKLAG VRLEPRNRSRHDTPGGYGIPSCVAHFSLIEIVGGREIPVQLPPGACPGMALWSPDGQRFVFQNVTSDSVELWIGDAATGH IRHIPGIRLNPIFGHTVQWLGGSSKLLLKLVPPHQGLPPANTPGTAGPDIQETFGGKGQSSTYETRDTLASIYDDSLFAY YGASQLAVLDIGTGVLRPVGVPALYDSVKGAPDGLHVLTVAIQPPYSHAVTYQRFARDIAVLDLVKNASAPIARLPLADR VPVHGVPEGPRDFDWRPTDPATLVWAEAQDHGDWNINVPHRDHLMLLQAPFTTKPVEIARTVQRFDGFDWTAQPDIAFLS EEDENRHWRRTRIVDLDHPAHPERILWDLSSDERYADPGAFIYHLLPNGTSVVRQDGHAVYLRGQGASPQGDRPFLDRLD LKTLKTQRLFRSNSDAYEQLLGFVPEPGKFLTWHQTVIDPPNAFLRTLGPQHPTPAQSEPDYASSTARITHITDPTPEVR QIKKRLVTYKRNDGVDLSFTLYTPPDYQEGQRLPAILYAYPADFANSTQAGQVTGSQHTFTRLPYYRLLLLAGYAIIDNA SFPIVGDPKTAYDTYLEQLKADATAAVDKAVALGVVDRERIGITGHSHGALMTANLIAHTDLFRAGVATSGSYNKTFTPF GFQNERRILWQAKDVYLKASPFFYADKIKHPLLLIHGEDDANPGTEPFQSRKFYQAIRGNGGIAKLVMLPHEPHWYTALE SNQQVVYEMLNWFDTHVKQAPRKPESPPLIPPH
Sequences:
>Translated_833_residues MPSRRDLCSTLLILVMTASFGVIPAFADYRTPPEHILKVLKAPLTPTPSLDPTGHRLLLTTQQTYPSITRVAQPYLKLAG VRLEPRNRSRHDTPGGYGIPSCVAHFSLIEIVGGREIPVQLPPGACPGMALWSPDGQRFVFQNVTSDSVELWIGDAATGH IRHIPGIRLNPIFGHTVQWLGGSSKLLLKLVPPHQGLPPANTPGTAGPDIQETFGGKGQSSTYETRDTLASIYDDSLFAY YGASQLAVLDIGTGVLRPVGVPALYDSVKGAPDGLHVLTVAIQPPYSHAVTYQRFARDIAVLDLVKNASAPIARLPLADR VPVHGVPEGPRDFDWRPTDPATLVWAEAQDHGDWNINVPHRDHLMLLQAPFTTKPVEIARTVQRFDGFDWTAQPDIAFLS EEDENRHWRRTRIVDLDHPAHPERILWDLSSDERYADPGAFIYHLLPNGTSVVRQDGHAVYLRGQGASPQGDRPFLDRLD LKTLKTQRLFRSNSDAYEQLLGFVPEPGKFLTWHQTVIDPPNAFLRTLGPQHPTPAQSEPDYASSTARITHITDPTPEVR QIKKRLVTYKRNDGVDLSFTLYTPPDYQEGQRLPAILYAYPADFANSTQAGQVTGSQHTFTRLPYYRLLLLAGYAIIDNA SFPIVGDPKTAYDTYLEQLKADATAAVDKAVALGVVDRERIGITGHSHGALMTANLIAHTDLFRAGVATSGSYNKTFTPF GFQNERRILWQAKDVYLKASPFFYADKIKHPLLLIHGEDDANPGTEPFQSRKFYQAIRGNGGIAKLVMLPHEPHWYTALE SNQQVVYEMLNWFDTHVKQAPRKPESPPLIPPH >Mature_832_residues PSRRDLCSTLLILVMTASFGVIPAFADYRTPPEHILKVLKAPLTPTPSLDPTGHRLLLTTQQTYPSITRVAQPYLKLAGV RLEPRNRSRHDTPGGYGIPSCVAHFSLIEIVGGREIPVQLPPGACPGMALWSPDGQRFVFQNVTSDSVELWIGDAATGHI RHIPGIRLNPIFGHTVQWLGGSSKLLLKLVPPHQGLPPANTPGTAGPDIQETFGGKGQSSTYETRDTLASIYDDSLFAYY GASQLAVLDIGTGVLRPVGVPALYDSVKGAPDGLHVLTVAIQPPYSHAVTYQRFARDIAVLDLVKNASAPIARLPLADRV PVHGVPEGPRDFDWRPTDPATLVWAEAQDHGDWNINVPHRDHLMLLQAPFTTKPVEIARTVQRFDGFDWTAQPDIAFLSE EDENRHWRRTRIVDLDHPAHPERILWDLSSDERYADPGAFIYHLLPNGTSVVRQDGHAVYLRGQGASPQGDRPFLDRLDL KTLKTQRLFRSNSDAYEQLLGFVPEPGKFLTWHQTVIDPPNAFLRTLGPQHPTPAQSEPDYASSTARITHITDPTPEVRQ IKKRLVTYKRNDGVDLSFTLYTPPDYQEGQRLPAILYAYPADFANSTQAGQVTGSQHTFTRLPYYRLLLLAGYAIIDNAS FPIVGDPKTAYDTYLEQLKADATAAVDKAVALGVVDRERIGITGHSHGALMTANLIAHTDLFRAGVATSGSYNKTFTPFG FQNERRILWQAKDVYLKASPFFYADKIKHPLLLIHGEDDANPGTEPFQSRKFYQAIRGNGGIAKLVMLPHEPHWYTALES NQQVVYEMLNWFDTHVKQAPRKPESPPLIPPH
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92453; Mature: 92322
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRRDLCSTLLILVMTASFGVIPAFADYRTPPEHILKVLKAPLTPTPSLDPTGHRLLLT CCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE TQQTYPSITRVAQPYLKLAGVRLEPRNRSRHDTPGGYGIPSCVAHFSLIEIVGGREIPVQ ECCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE LPPGACPGMALWSPDGQRFVFQNVTSDSVELWIGDAATGHIRHIPGIRLNPIFGHTVQWL CCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCEECCCCCCHHHHC GGSSKLLLKLVPPHQGLPPANTPGTAGPDIQETFGGKGQSSTYETRDTLASIYDDSLFAY CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE YGASQLAVLDIGTGVLRPVGVPALYDSVKGAPDGLHVLTVAIQPPYSHAVTYQRFARDIA ECCCEEEEEECCCCHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH VLDLVKNASAPIARLPLADRVPVHGVPEGPRDFDWRPTDPATLVWAEAQDHGDWNINVPH HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCC RDHLMLLQAPFTTKPVEIARTVQRFDGFDWTAQPDIAFLSEEDENRHWRRTRIVDLDHPA CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC HPERILWDLSSDERYADPGAFIYHLLPNGTSVVRQDGHAVYLRGQGASPQGDRPFLDRLD CCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHH LKTLKTQRLFRSNSDAYEQLLGFVPEPGKFLTWHQTVIDPPNAFLRTLGPQHPTPAQSEP HHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHCCCCCCCCCCCCC DYASSTARITHITDPTPEVRQIKKRLVTYKRNDGVDLSFTLYTPPDYQEGQRLPAILYAY CCCCCCEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEC PADFANSTQAGQVTGSQHTFTRLPYYRLLLLAGYAIIDNASFPIVGDPKTAYDTYLEQLK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEECCCCHHHHHHHHHHH ADATAAVDKAVALGVVDRERIGITGHSHGALMTANLIAHTDLFRAGVATSGSYNKTFTPF HHHHHHHHHHHHEECCCCCCEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC GFQNERRILWQAKDVYLKASPFFYADKIKHPLLLIHGEDDANPGTEPFQSRKFYQAIRGN CCCCCCEEEEEEEEEEEECCCCEEHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCC GGIAKLVMLPHEPHWYTALESNQQVVYEMLNWFDTHVKQAPRKPESPPLIPPH CCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PSRRDLCSTLLILVMTASFGVIPAFADYRTPPEHILKVLKAPLTPTPSLDPTGHRLLLT CCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEE TQQTYPSITRVAQPYLKLAGVRLEPRNRSRHDTPGGYGIPSCVAHFSLIEIVGGREIPVQ ECCCCHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEE LPPGACPGMALWSPDGQRFVFQNVTSDSVELWIGDAATGHIRHIPGIRLNPIFGHTVQWL CCCCCCCCCEEECCCCCEEEEECCCCCCEEEEECCCCCCCEEECCCCEECCCCCCHHHHC GGSSKLLLKLVPPHQGLPPANTPGTAGPDIQETFGGKGQSSTYETRDTLASIYDDSLFAY CCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE YGASQLAVLDIGTGVLRPVGVPALYDSVKGAPDGLHVLTVAIQPPYSHAVTYQRFARDIA ECCCEEEEEECCCCHHCCCCCHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHH VLDLVKNASAPIARLPLADRVPVHGVPEGPRDFDWRPTDPATLVWAEAQDHGDWNINVPH HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCC RDHLMLLQAPFTTKPVEIARTVQRFDGFDWTAQPDIAFLSEEDENRHWRRTRIVDLDHPA CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC HPERILWDLSSDERYADPGAFIYHLLPNGTSVVRQDGHAVYLRGQGASPQGDRPFLDRLD CCCCEEEECCCCCCCCCCCEEEEEECCCCCCEEECCCCEEEEEECCCCCCCCCCHHHHHH LKTLKTQRLFRSNSDAYEQLLGFVPEPGKFLTWHQTVIDPPNAFLRTLGPQHPTPAQSEP HHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHHHCCCCCCCCCCCCC DYASSTARITHITDPTPEVRQIKKRLVTYKRNDGVDLSFTLYTPPDYQEGQRLPAILYAY CCCCCCEEEEEECCCCHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCCCCCEEEEEC PADFANSTQAGQVTGSQHTFTRLPYYRLLLLAGYAIIDNASFPIVGDPKTAYDTYLEQLK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEECCCCHHHHHHHHHHH ADATAAVDKAVALGVVDRERIGITGHSHGALMTANLIAHTDLFRAGVATSGSYNKTFTPF HHHHHHHHHHHHEECCCCCCEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCC GFQNERRILWQAKDVYLKASPFFYADKIKHPLLLIHGEDDANPGTEPFQSRKFYQAIRGN CCCCCCEEEEEEEEEEEECCCCEEHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCC GGIAKLVMLPHEPHWYTALESNQQVVYEMLNWFDTHVKQAPRKPESPPLIPPH CCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA