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The map label for this gene is hpmB [H]

Identifier: 182682552

GI number: 182682552

Start: 2284035

End: 2285780

Strand: Reverse

Name: hpmB [H]

Synonym: XfasM23_2040

Alternate gene names: 182682552

Gene position: 2285780-2284035 (Counterclockwise)

Preceding gene: 182682553

Following gene: 182682548

Centisome position: 90.14

GC content: 54.58

Gene sequence:

>1746_bases
ATGATCCAGAATACAAAAACGTCTTCTTTGAACACCATGGCAATACGATTCAAACCATATATTCGATGGTGCCTGCTCCC
ATTGATCGCAGCGCTGCTCCAACAACAGAGCGCATACGCCCAAGTCGCACCACCCGATCAAGAATTGCTCCGCCAACAAG
AACGTGAACGCGCACTCCGTGAACAACTGGAGCGCGGCACCGATACCCGTTTACAAGAAGTACCGGGAAAAATCCCCTCC
TTATTGCCACATGACGAAACCCCCTGCTTCCCTATCCAGAAAATTTTTCTCGAAGGTGACAAAGCCGCCCGCTTTCAATG
GGCCTTGACCGCTGCCAACCCACCCCATGATCCAGCTATCGGGCGTTGCCTCGGCACCGCAGGCATCAACATTGTTATCT
CCCGCGTACAAAACGCCATCATTTCCCGTGGCTACGTCACCACACGCGTCCTTGCTACCCCACAAGACCTCAAAAGCGGA
GAACTTCACCTCACCCTCATTCCCGGCATACTCGCCCACATTCGTTTTGCTCCCGGCACCAAACCCGATGCCACTTTTTG
GAACGCCATCCCCGCCCACCCTGGCGACCTACTCAACCTGCGCGATATAGAACAAGGTCTAGAGAACTTCAAACGCGTTC
CCACAGTCGAAGCGGATATCCAAATCGTTCCCACCGAAGGAGACAACTCTCAGCCCGGTCAAAGCGATTTACTTATTTCC
TGGACCCAAGGCCGCCCTGTCCGTTTCAATGCCAGTTTTGACGACTCAGGCAGCAAAAGTACCGGCAAAACCCAGGCTGG
AGTCACTCTCTCTCTGGACCATGCCCTGACTCAAAATGACCTCTTCTACATCAGCCTCAACCGTTCTGCCTTCAACGGCA
GCAAACGCGGGACCCGAGGCATCACCCTCCATTACTCCATGCCCTTAGGTAACTGGTTAATCGCCGCCACCCACAGCGGC
TACAACTACCACCAAAGCATTGCAGGCAGCCAACAAACCTATATTTACAGCGGTGAAAGCCATAACAGCGAACTCAAACT
ATCCCGGCGCCTCATCCGTACCGCCAGCAGCAAAAGCGGTATCTACCTACGTGGTTGGACCCGTGACTCGAAAAATTTCA
TCGACGATACAGAAGTCCTCGTACAACGCCGTCGCATGGCAGGTTGGGAAATGGGCCTCACCTATCGCCGCTACATCAAT
ACCGCAACACTGGATACTACTCTGGGTTTCCGGCGCGGTACCGGTGCCTTTGGTGCATTACCCGCCCCAGAAGAACTCTT
TGATGAAGGCACCTCCCGTCCCAAAATCTACTTTGCTGACTTACAGTTCAACCTTCCCTTTCAACTGGGTCACCAATCCT
TGCGCTATACCGGTAGTTGGCGTGCCCAATGGAACCGTACCCCTCTGATTACCCAAGACCGTTTTTCCATCGGCGGGCGC
TACACCGTCCGTGGCTTCGATGGCGAAACTACCTTGATCGGCGAGCGCGGCTGGCTGTTGCGTAACGATCTTGGGCTATC
CCTTGGAGGCGGCCAAGAAGCGTACCTCGCCCTTGACTATGCACACATCGGAGGGGCGTCGGCCTACTTACAACAAGGCA
ACCACCTTGCCGGTACCGCCTTGGGATTGCGTGGAGGCCACCGCAGCCTATTTTGGGATGTCTTCGTAGGCGCCCCAATC
AACCGCCCACGCACCTTCTCAAACGCCTATACCGTGACCGGATTCAGCTTGAACTGGTCCTTCTAA

Upstream 100 bases:

>100_bases
TCCCCACTCATACCTCGATAAAATTCACTATTCATTGAATGAATAGGGTGCATGGCACTTGGAGCGCTCCCTTTCACAGC
AACACAAGCAAGGTAAAGGG

Downstream 100 bases:

>100_bases
ACACATACCGCTCTCAAAACATTTCACTTAATGGGGATACCATGAACAAGGATCTCTAGCGTCTCATCTACAACTGTGCT
CTGCGTTTGTGGCAAGTCAC

Product: polypeptide-transport-associated domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 581

Protein sequence:

>581_residues
MIQNTKTSSLNTMAIRFKPYIRWCLLPLIAALLQQQSAYAQVAPPDQELLRQQERERALREQLERGTDTRLQEVPGKIPS
LLPHDETPCFPIQKIFLEGDKAARFQWALTAANPPHDPAIGRCLGTAGINIVISRVQNAIISRGYVTTRVLATPQDLKSG
ELHLTLIPGILAHIRFAPGTKPDATFWNAIPAHPGDLLNLRDIEQGLENFKRVPTVEADIQIVPTEGDNSQPGQSDLLIS
WTQGRPVRFNASFDDSGSKSTGKTQAGVTLSLDHALTQNDLFYISLNRSAFNGSKRGTRGITLHYSMPLGNWLIAATHSG
YNYHQSIAGSQQTYIYSGESHNSELKLSRRLIRTASSKSGIYLRGWTRDSKNFIDDTEVLVQRRRMAGWEMGLTYRRYIN
TATLDTTLGFRRGTGAFGALPAPEELFDEGTSRPKIYFADLQFNLPFQLGHQSLRYTGSWRAQWNRTPLITQDRFSIGGR
YTVRGFDGETTLIGERGWLLRNDLGLSLGGGQEAYLALDYAHIGGASAYLQQGNHLAGTALGLRGGHRSLFWDVFVGAPI
NRPRTFSNAYTVTGFSLNWSF

Sequences:

>Translated_581_residues
MIQNTKTSSLNTMAIRFKPYIRWCLLPLIAALLQQQSAYAQVAPPDQELLRQQERERALREQLERGTDTRLQEVPGKIPS
LLPHDETPCFPIQKIFLEGDKAARFQWALTAANPPHDPAIGRCLGTAGINIVISRVQNAIISRGYVTTRVLATPQDLKSG
ELHLTLIPGILAHIRFAPGTKPDATFWNAIPAHPGDLLNLRDIEQGLENFKRVPTVEADIQIVPTEGDNSQPGQSDLLIS
WTQGRPVRFNASFDDSGSKSTGKTQAGVTLSLDHALTQNDLFYISLNRSAFNGSKRGTRGITLHYSMPLGNWLIAATHSG
YNYHQSIAGSQQTYIYSGESHNSELKLSRRLIRTASSKSGIYLRGWTRDSKNFIDDTEVLVQRRRMAGWEMGLTYRRYIN
TATLDTTLGFRRGTGAFGALPAPEELFDEGTSRPKIYFADLQFNLPFQLGHQSLRYTGSWRAQWNRTPLITQDRFSIGGR
YTVRGFDGETTLIGERGWLLRNDLGLSLGGGQEAYLALDYAHIGGASAYLQQGNHLAGTALGLRGGHRSLFWDVFVGAPI
NRPRTFSNAYTVTGFSLNWSF
>Mature_581_residues
MIQNTKTSSLNTMAIRFKPYIRWCLLPLIAALLQQQSAYAQVAPPDQELLRQQERERALREQLERGTDTRLQEVPGKIPS
LLPHDETPCFPIQKIFLEGDKAARFQWALTAANPPHDPAIGRCLGTAGINIVISRVQNAIISRGYVTTRVLATPQDLKSG
ELHLTLIPGILAHIRFAPGTKPDATFWNAIPAHPGDLLNLRDIEQGLENFKRVPTVEADIQIVPTEGDNSQPGQSDLLIS
WTQGRPVRFNASFDDSGSKSTGKTQAGVTLSLDHALTQNDLFYISLNRSAFNGSKRGTRGITLHYSMPLGNWLIAATHSG
YNYHQSIAGSQQTYIYSGESHNSELKLSRRLIRTASSKSGIYLRGWTRDSKNFIDDTEVLVQRRRMAGWEMGLTYRRYIN
TATLDTTLGFRRGTGAFGALPAPEELFDEGTSRPKIYFADLQFNLPFQLGHQSLRYTGSWRAQWNRTPLITQDRFSIGGR
YTVRGFDGETTLIGERGWLLRNDLGLSLGGGQEAYLALDYAHIGGASAYLQQGNHLAGTALGLRGGHRSLFWDVFVGAPI
NRPRTFSNAYTVTGFSLNWSF

Specific function: Probable member of a two partner secretion pathway (TPS) in which it mediates the secretion of hemolysin [H]

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tpsB (TC 1.B.20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005565
- InterPro:   IPR013686 [H]

Pfam domain/function: PF08479 POTRA_2; PF03865 ShlB [H]

EC number: NA

Molecular weight: Translated: 64652; Mature: 64652

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQNTKTSSLNTMAIRFKPYIRWCLLPLIAALLQQQSAYAQVAPPDQELLRQQERERALR
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHH
EQLERGTDTRLQEVPGKIPSLLPHDETPCFPIQKIFLEGDKAARFQWALTAANPPHDPAI
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCCCCHH
GRCLGTAGINIVISRVQNAIISRGYVTTRVLATPQDLKSGELHLTLIPGILAHIRFAPGT
HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHEEECCCC
KPDATFWNAIPAHPGDLLNLRDIEQGLENFKRVPTVEADIQIVPTEGDNSQPGQSDLLIS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEE
WTQGRPVRFNASFDDSGSKSTGKTQAGVTLSLDHALTQNDLFYISLNRSAFNGSKRGTRG
ECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCE
ITLHYSMPLGNWLIAATHSGYNYHQSIAGSQQTYIYSGESHNSELKLSRRLIRTASSKSG
EEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
IYLRGWTRDSKNFIDDTEVLVQRRRMAGWEMGLTYRRYINTATLDTTLGFRRGTGAFGAL
EEEEEECCCCCCCCCHHHHHHHHHHHCCHHHCCEEHHHHCCCEEEHCCCCCCCCCCCCCC
PAPEELFDEGTSRPKIYFADLQFNLPFQLGHQSLRYTGSWRAQWNRTPLITQDRFSIGGR
CCCHHHHHCCCCCCEEEEEEEEECCCHHHCCCEEEECCCEEEECCCCCCEECCCCCCCCE
YTVRGFDGETTLIGERGWLLRNDLGLSLGGGQEAYLALDYAHIGGASAYLQQGNHLAGTA
EEEEECCCCEEEEECCCCEEECCCCEEECCCCEEEEEEEEHHCCCHHHHHHCCCCEEEEE
LGLRGGHRSLFWDVFVGAPINRPRTFSNAYTVTGFSLNWSF
EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECC
>Mature Secondary Structure
MIQNTKTSSLNTMAIRFKPYIRWCLLPLIAALLQQQSAYAQVAPPDQELLRQQERERALR
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHH
EQLERGTDTRLQEVPGKIPSLLPHDETPCFPIQKIFLEGDKAARFQWALTAANPPHDPAI
HHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCEEEEEEEECCCCCCCCHH
GRCLGTAGINIVISRVQNAIISRGYVTTRVLATPQDLKSGELHLTLIPGILAHIRFAPGT
HHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHEEECCCC
KPDATFWNAIPAHPGDLLNLRDIEQGLENFKRVPTVEADIQIVPTEGDNSQPGQSDLLIS
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCCCCEEEE
WTQGRPVRFNASFDDSGSKSTGKTQAGVTLSLDHALTQNDLFYISLNRSAFNGSKRGTRG
ECCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCE
ITLHYSMPLGNWLIAATHSGYNYHQSIAGSQQTYIYSGESHNSELKLSRRLIRTASSKSG
EEEEEECCCCCEEEEEECCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCC
IYLRGWTRDSKNFIDDTEVLVQRRRMAGWEMGLTYRRYINTATLDTTLGFRRGTGAFGAL
EEEEEECCCCCCCCCHHHHHHHHHHHCCHHHCCEEHHHHCCCEEEHCCCCCCCCCCCCCC
PAPEELFDEGTSRPKIYFADLQFNLPFQLGHQSLRYTGSWRAQWNRTPLITQDRFSIGGR
CCCHHHHHCCCCCCEEEEEEEEECCCHHHCCCEEEECCCEEEECCCCCCEECCCCCCCCE
YTVRGFDGETTLIGERGWLLRNDLGLSLGGGQEAYLALDYAHIGGASAYLQQGNHLAGTA
EEEEECCCCEEEEECCCCEEECCCCEEECCCCEEEEEEEEHHCCCHHHHHHCCCCEEEEE
LGLRGGHRSLFWDVFVGAPINRPRTFSNAYTVTGFSLNWSF
EECCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2407716 [H]