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The map label for this gene is dcd

Identifier: 182682513

GI number: 182682513

Start: 2237803

End: 2238378

Strand: Direct

Name: dcd

Synonym: XfasM23_2000

Alternate gene names: 182682513

Gene position: 2237803-2238378 (Clockwise)

Preceding gene: 182682512

Following gene: 182682519

Centisome position: 88.25

GC content: 51.39

Gene sequence:

>576_bases
ATGAGCATCAAAAGCGACCGCTGGATCCGGCATATGGCCAAACAACACGGCATGATTGCACCGTTTGAACCCGGTCAAAT
CAAACAAAACACCACAGGACAACGCATCGTCAGTTATGGCACATCCAGTTACGGCTACGACGTGCGCTGTTCCCATGAAT
TCAAGATATTCACCAATATCAACTCAACCATTGTCGATCCAAAACAATTCGATAATGGAAGCTTCATTGATGTCGAATCA
GACGTCTGCATCATCCCACCGAACAGCTTCGCCTTGGCACGTACCATTGAGTATTTCCGCATCCCACGCAATGTACTGGT
GATCTGTCTTGGGAAAAGCACCTACGCACGTTGTGGAATCATCGTCAATGTGACCCCACTGGAGCCGGAGTGGGAAGGAC
ACGTCACCCTTGAATTCAGCAACACCACCCCGTTACCCGCACGCATCTACGCGAACGAGGGTGTAGCGCAGATGTTGTTC
CTGCAAGCCGATCCCGACGATGTGTGCGAAACATCCTACCGCGACCGCAACGGGAAATATCAAGGACAGACGGGCGTGAC
GCTACCACGCACTTAA

Upstream 100 bases:

>100_bases
ACACTATCACCGGCGGATAAGTAAACCTATAGCCGACACGTACATCACTCAGCACGGTTAGAATGCACGGCCAAACGCCC
ACTGTTTCCAAGGACTCCAC

Downstream 100 bases:

>100_bases
AAACAGGCAAATCCAACGCATCCCACCAAACAGCGGCATACACCGTTGCGCTCAGTCAGACAAAGACCAGGAAGCGGAGA
GCATCCGCTACAACGCTCTG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSIKSDRWIRHMAKQHGMIAPFEPGQIKQNTTGQRIVSYGTSSYGYDVRCSHEFKIFTNINSTIVDPKQFDNGSFIDVES
DVCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLF
LQADPDDVCETSYRDRNGKYQGQTGVTLPRT

Sequences:

>Translated_191_residues
MSIKSDRWIRHMAKQHGMIAPFEPGQIKQNTTGQRIVSYGTSSYGYDVRCSHEFKIFTNINSTIVDPKQFDNGSFIDVES
DVCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLF
LQADPDDVCETSYRDRNGKYQGQTGVTLPRT
>Mature_190_residues
SIKSDRWIRHMAKQHGMIAPFEPGQIKQNTTGQRIVSYGTSSYGYDVRCSHEFKIFTNINSTIVDPKQFDNGSFIDVESD
VCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFL
QADPDDVCETSYRDRNGKYQGQTGVTLPRT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_XYLF2 (B2I9E4)

Other databases:

- EMBL:   CP001011
- RefSeq:   YP_001830673.1
- ProteinModelPortal:   B2I9E4
- SMR:   B2I9E4
- GeneID:   6203354
- GenomeReviews:   CP001011_GR
- KEGG:   xfn:XfasM23_2000
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 21544; Mature: 21412

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKSDRWIRHMAKQHGMIAPFEPGQIKQNTTGQRIVSYGTSSYGYDVRCSHEFKIFTNI
CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKQFDNGSFIDVESDVCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGI
CCEEECHHHCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEE
IVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFLQADPDDVCETSYRDRNGKY
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCC
QGQTGVTLPRT
CCCCCEECCCC
>Mature Secondary Structure 
SIKSDRWIRHMAKQHGMIAPFEPGQIKQNTTGQRIVSYGTSSYGYDVRCSHEFKIFTNI
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEEECC
NSTIVDPKQFDNGSFIDVESDVCIIPPNSFALARTIEYFRIPRNVLVICLGKSTYARCGI
CCEEECHHHCCCCCEEEECCCEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCCEEEE
IVNVTPLEPEWEGHVTLEFSNTTPLPARIYANEGVAQMLFLQADPDDVCETSYRDRNGKY
EEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCCHHHHHCCCCCCCCCC
QGQTGVTLPRT
CCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA