Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

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The map label for this gene is 182682512

Identifier: 182682512

GI number: 182682512

Start: 2236444

End: 2237229

Strand: Direct

Name: 182682512

Synonym: XfasM23_1999

Alternate gene names: NA

Gene position: 2236444-2237229 (Clockwise)

Preceding gene: 182682511

Following gene: 182682513

Centisome position: 88.2

GC content: 55.73

Gene sequence:

>786_bases
ATGACGATTCAATCTCTCATCGTCACCATTGGCTCGGGAGGTCTCGTCGGCTTCGCGCTCGGTCTGCTCGGAGGCGGCGG
CTCGATCCTTGCCACACCGCTCCTGCTTTATGTCGTGGGTGTGACCAACCCCCATATCGCCATCGGAACAAGCGCAGTCG
CAGTGTCCGTCAACGCTTATGCCAATCTAATCGCCCATGCGTGGAAGGGCCATGTATGGTGGCGATCCGCCGTGATTTTT
GCGCTGGTCGGGACGTTGGGCGCCTTCCTTGGCTCAAGCATCGGTATGCTGATTGATGGACAGCGTTTACTATTGCTGTT
CGGTTTGCTGATGGCCATGGTGGGTCTGCTGATGCTGCGTGGGCGTGCAACTGCTCCTCGTGCCGAGCACCACCAAACTG
TACTTCGGATGTGTATGAAAACCAGCTCAGTCGCAATACTCACGGGTGCAGCATCGGGCTTCTTCGGGATTGGTGGCGGT
TTTCTGATCGTGCCCGCCCTCATTTTTGCGACTAGGATGCCCACTATCAACGCCATTGGCTCCTCGTTACTCGCGGTCGG
CAGCTTTGGGCTCATCACTACCTTGAACTATGCACGCCACGACCTGGTGAACTGGACGATTGCCATGGAATTCATCGTAG
GCGGTATTACAGGAGGAGGGCTAGGCACACTTCTAGCAACCCGACTTTCAGCAAGCAAACACCTGCTCAATCGGGTTTTC
GGGTTGATCGTAATTGCTGTCGCGATCTATGTCATTTGGCGGAGTTGGGCTTCTCTCGTAGCTTGA

Upstream 100 bases:

>100_bases
TCGCCAGTCTGTCTACAGGACTTGGGTCAGTTCTGCTCTTTGTAGCAGCGATGGCGGCAGGCATGATCATCCATGATCGA
ATTGTCGTGAGGAGCCTCTC

Downstream 100 bases:

>100_bases
CTCGATATCCCCCCTGGGCTACCAGAAAGGACAATGGCATTCGGATTCTTTCGTGAGTATTCATGTCAAAGATGCCCAGG
GAGCACCATCAAGCACGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MTIQSLIVTIGSGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAYANLIAHAWKGHVWWRSAVIF
ALVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVGLLMLRGRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGG
FLIVPALIFATRMPTINAIGSSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSASKHLLNRVF
GLIVIAVAIYVIWRSWASLVA

Sequences:

>Translated_261_residues
MTIQSLIVTIGSGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAYANLIAHAWKGHVWWRSAVIF
ALVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVGLLMLRGRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGG
FLIVPALIFATRMPTINAIGSSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSASKHLLNRVF
GLIVIAVAIYVIWRSWASLVA
>Mature_260_residues
TIQSLIVTIGSGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAYANLIAHAWKGHVWWRSAVIFA
LVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVGLLMLRGRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGGF
LIVPALIFATRMPTINAIGSSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSASKHLLNRVFG
LIVIAVAIYVIWRSWASLVA

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1894_XYLFT (Q87AD2)

Other databases:

- EMBL:   AE009442
- RefSeq:   NP_780076.1
- STRING:   Q87AD2
- GeneID:   1143236
- GenomeReviews:   AE009442_GR
- KEGG:   xft:PD1894
- eggNOG:   COG0730
- HOGENOM:   HBG726491
- OMA:   SAISHAR
- ProtClustDB:   CLSK799607
- BioCyc:   XFAS183190:PD_1894-MONOMER
- InterPro:   IPR002781

Pfam domain/function: PF01925 DUF81

EC number: NA

Molecular weight: Translated: 27078; Mature: 26947

Theoretical pI: Translated: 11.68; Mature: 11.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x163b8b4c)-; HASH(0x1631f900)-; HASH(0x15013544)-; HASH(0x158b9390)-; HASH(0x169c7b18)-; HASH(0x164ccaf4)-; HASH(0x167fe8d0)-; HASH(0x163fb5bc)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQSLIVTIGSGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAY
CCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCHHHEEEHHHH
ANLIAHAWKGHVWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVGLLMLR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHC
GRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGGFLIVPALIFATRMPTINAIG
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
SSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSASKHLLNRVF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLIVIAVAIYVIWRSWASLVA
HHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure 
TIQSLIVTIGSGGLVGFALGLLGGGGSILATPLLLYVVGVTNPHIAIGTSAVAVSVNAY
CHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEECCHHHEEEHHHH
ANLIAHAWKGHVWWRSAVIFALVGTLGAFLGSSIGMLIDGQRLLLLFGLLMAMVGLLMLR
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHC
GRATAPRAEHHQTVLRMCMKTSSVAILTGAASGFFGIGGGFLIVPALIFATRMPTINAIG
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH
SSLLAVGSFGLITTLNYARHDLVNWTIAMEFIVGGITGGGLGTLLATRLSASKHLLNRVF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
GLIVIAVAIYVIWRSWASLVA
HHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478