Definition | Xylella fastidiosa M23 chromosome, complete genome. |
---|---|
Accession | NC_010577 |
Length | 2,535,690 |
Click here to switch to the map view.
The map label for this gene is 182682507
Identifier: 182682507
GI number: 182682507
Start: 2232561
End: 2233541
Strand: Direct
Name: 182682507
Synonym: XfasM23_1994
Alternate gene names: NA
Gene position: 2232561-2233541 (Clockwise)
Preceding gene: 182682498
Following gene: 182682508
Centisome position: 88.05
GC content: 54.03
Gene sequence:
>981_bases ATGAATGCAACGTTGACTACCACGTTACACATTGACTACGTACCCAGAGCAACCCTACCCATGTTGCTGGCTGATCATTG CGTACTGGCAGTGTTTGGTTTTGGTGCCGATGCACCTCACGCTACTGACCCGCGCTACGTGCGCGTGCCTTTGGAACCAT ACGGCAACACCTCATTGGAAGTATGGCGCAGCAACACACCGACACAGGTCGGGTGCAAAGATGGGATTGCCTGGGCAAGT AACGATCAACTGCAATTTGGCACGATTGCACTGGAGGAGAACACACAGCCCATCGATATCTGTAGTGAAGAACTCTACAC ACGCCTGACACATTTCGTTGCTGGCAGCAGCACTCCCCATTTATTACGGATCTGGAACTATGTGGATGGAATCACCATCG GTACTGGCGATAACGAACGCTACCGCAAATTCAACATTGGCCGCGCACGTGGCATCAGCGGCTTAAAGACCGCGCAGCTG CCTGCTGCAACAGCGATCGGTTACTCCAACGGGCACCGCATCCTTCACGTGTACTGGTTGGCCTCGGCGCACCCTGGCAC ACCACTGGAAAACCCCCGTCAAATTAGCGCCTACTGCTACCCAAAGACTTACGGCCCACAACCTCCAAGCTTCGCACGAG CAATGCTCCCACCCCGCAACAGCGCAATGCCACTGTTGTTATCTGGCACGGCGGCCATCGTTGGCCATCAATCCATGCAC CCGGGTGACCCATTGGCACAACTAGAAGAAATCTTCGCAAACTTCAATGTGCTCCTCCGTCACGCGCACGCACAGCACCC CAAAATACCAACACAGTTCGACCTAAAAACACGATTAAAAGTCTACGTGCGCGAACAGATGGATTTGCCACACATTGCCA CCGCACTGCAGGAACGCCTGGGCGCAATTCCGCACCTGCTATTGCACGGCACCATATGCCGCAATGATCTTCTCGTAGAG ATTGATGGATACACCGGTTGA
Upstream 100 bases:
>100_bases GGGAATAGACGTAACGCTCACATTAAAAGTGTGAAGCAACCTAACAACATAGCTACTGGCACTATTCAGCAGCGGCAAGA CGCCACCATCACACAATCTA
Downstream 100 bases:
>100_bases GACTCTCTTGAGCAACCATACCCAATACGAACATGTGTTGGGAATCGTCGGAAATGAATGACAACAACATCCAAGTAGAT GAGTCACCAGACACTGCATA
Product: putative pteridine-dependent deoxygenase like protein
Products: NA
Alternate protein names: Pteridine-Dependent Dioxygenase; Pteridine-Dependent Deoxygenase Like Protein; FkbO Protein; Pteridine-Dependent Deoxygenase; Dioxygenase
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MNATLTTTLHIDYVPRATLPMLLADHCVLAVFGFGADAPHATDPRYVRVPLEPYGNTSLEVWRSNTPTQVGCKDGIAWAS NDQLQFGTIALEENTQPIDICSEELYTRLTHFVAGSSTPHLLRIWNYVDGITIGTGDNERYRKFNIGRARGISGLKTAQL PAATAIGYSNGHRILHVYWLASAHPGTPLENPRQISAYCYPKTYGPQPPSFARAMLPPRNSAMPLLLSGTAAIVGHQSMH PGDPLAQLEEIFANFNVLLRHAHAQHPKIPTQFDLKTRLKVYVREQMDLPHIATALQERLGAIPHLLLHGTICRNDLLVE IDGYTG
Sequences:
>Translated_326_residues MNATLTTTLHIDYVPRATLPMLLADHCVLAVFGFGADAPHATDPRYVRVPLEPYGNTSLEVWRSNTPTQVGCKDGIAWAS NDQLQFGTIALEENTQPIDICSEELYTRLTHFVAGSSTPHLLRIWNYVDGITIGTGDNERYRKFNIGRARGISGLKTAQL PAATAIGYSNGHRILHVYWLASAHPGTPLENPRQISAYCYPKTYGPQPPSFARAMLPPRNSAMPLLLSGTAAIVGHQSMH PGDPLAQLEEIFANFNVLLRHAHAQHPKIPTQFDLKTRLKVYVREQMDLPHIATALQERLGAIPHLLLHGTICRNDLLVE IDGYTG >Mature_326_residues MNATLTTTLHIDYVPRATLPMLLADHCVLAVFGFGADAPHATDPRYVRVPLEPYGNTSLEVWRSNTPTQVGCKDGIAWAS NDQLQFGTIALEENTQPIDICSEELYTRLTHFVAGSSTPHLLRIWNYVDGITIGTGDNERYRKFNIGRARGISGLKTAQL PAATAIGYSNGHRILHVYWLASAHPGTPLENPRQISAYCYPKTYGPQPPSFARAMLPPRNSAMPLLLSGTAAIVGHQSMH PGDPLAQLEEIFANFNVLLRHAHAQHPKIPTQFDLKTRLKVYVREQMDLPHIATALQERLGAIPHLLLHGTICRNDLLVE IDGYTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36007; Mature: 36007
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNATLTTTLHIDYVPRATLPMLLADHCVLAVFGFGADAPHATDPRYVRVPLEPYGNTSLE CCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCEEE VWRSNTPTQVGCKDGIAWASNDQLQFGTIALEENTQPIDICSEELYTRLTHFVAGSSTPH EEECCCCCEECCCCCCEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCH LLRIWNYVDGITIGTGDNERYRKFNIGRARGISGLKTAQLPAATAIGYSNGHRILHVYWL HHEEEHHHCCEEEECCCCCCEEEECCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE ASAHPGTPLENPRQISAYCYPKTYGPQPPSFARAMLPPRNSAMPLLLSGTAAIVGHQSMH ECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEECCEEEEECCCCC PGDPLAQLEEIFANFNVLLRHAHAQHPKIPTQFDLKTRLKVYVREQMDLPHIATALQERL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHCCCHHHHHHHHHHH GAIPHLLLHGTICRNDLLVEIDGYTG HHHHHHHHHCEEECCCEEEEECCCCC >Mature Secondary Structure MNATLTTTLHIDYVPRATLPMLLADHCVLAVFGFGADAPHATDPRYVRVPLEPYGNTSLE CCCEEEEEEEEECCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEEECCCCCCCEEE VWRSNTPTQVGCKDGIAWASNDQLQFGTIALEENTQPIDICSEELYTRLTHFVAGSSTPH EEECCCCCEECCCCCCEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCH LLRIWNYVDGITIGTGDNERYRKFNIGRARGISGLKTAQLPAATAIGYSNGHRILHVYWL HHEEEHHHCCEEEECCCCCCEEEECCCHHCCCCCCCCCCCCCCEEECCCCCCEEEEEEEE ASAHPGTPLENPRQISAYCYPKTYGPQPPSFARAMLPPRNSAMPLLLSGTAAIVGHQSMH ECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCEEEEECCEEEEECCCCC PGDPLAQLEEIFANFNVLLRHAHAQHPKIPTQFDLKTRLKVYVREQMDLPHIATALQERL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEHHHCCCHHHHHHHHHHH GAIPHLLLHGTICRNDLLVEIDGYTG HHHHHHHHHCEEECCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA