Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is blh [H]
Identifier: 182682508
GI number: 182682508
Start: 2233967
End: 2235262
Strand: Direct
Name: blh [H]
Synonym: XfasM23_1995
Alternate gene names: 182682508
Gene position: 2233967-2235262 (Clockwise)
Preceding gene: 182682507
Following gene: 182682509
Centisome position: 88.1
GC content: 56.64
Gene sequence:
>1296_bases ATGAAAATAGTAGACATCAACGAACGACTGGCCATCTCAGGACAGCCGAATACTGACGAATTCATCAACTTCGCTCGTCG AGGTTATCGCAGCATCATTAACCTCCGGCCAGACGGAGAAGAACCAAACCAGCCCGGCAACGACGCCGAGCAAGCGGCGG CACGTCGCGCTGGACTTGCCTACAATTTCGTGCCGGTGATCGGAACGTCCATCACTGAGGCCGATATCCAGGCGTTCCAG CGAGCGATAGCAACGACGGAGGGATCGGTTCTGGTCCATTGCAAAAGCGGGACACGCGCCTTGATGCTTTACGCGCTGAG TGAGGTGATCGACGGACGCATGAAACGCGATGAAGTGGAGGCACTCGGCCACGCCCACGGTTTCGATCTTGGGCGCGCAG TGACCTGGTTAAAACGTCAAGCCATCCAGACTCCGCGCGTTTCAGGCTTCTTCGATCCGCGAACCGGAAGCATCCAGTAT GTGGTCACCGACCAGACTACGAAGCGATGCGCCATCATTGATCCGGTGTTAGATTTCGACGAGAAATCCGGCGCTACCGC AACGACAAACGCTGACGCCATTTTAGCCCATGTCGAGCAGCAGGGATTGACAGTAGAATGGATCCTCGACACACACCCAC ATGCTGACCATTTCTCCGCCGCTCAGTATCTGAAGCAAAGGACCGGCGCACCAACCGCAATCGGCACTCATGTAACGAAA GTGCAGCGACTGTGGAGAGAGATCTACAACTTGCCGACCCTAAGCACGAATGGATCACAATGGGATCATCTGTTCGCCGA CGGGGACGTCTTCAATGTGGGCTCCATCAAAGGACGGGTGATGTTTTCACCGGGCCACACGCTGGCTTCTGTCACCTATG TCATCGGTGATACCGCCTTCGTGCACGACACGATCTTCATGCCCGACTCGGGAACCGCGCGCGCCGATTTTCCCGGCGGA AGCGCACGAGCACTCTGGAGTTCCATCCAAGCGATTCTCTCGCTTCCCGACGAAACACGTCTATTCACCGGCCATGACTA TCAGCCATCAGGACGCCACCCACGCTGGGAAAGCACCGTCGGGGAACAGAAAAAGGCCAACTTACATCTGGCAGGCGTGG ACGAGACAACGTTTGTGGCACTGCGCGAAGCACGTGACAAGACACTACCGATGCCAAAACTGATCCTGCATGCACTCCAG GTCAATGTGCTCGGCGGGCAGCTACCGGAGCCGGAAGCAAACGGCAGACGCTACCTCAAGTTCCCGCTTAATGCACTTGA AGGTGCCGCATGGTGA
Upstream 100 bases:
>100_bases ACGGCGTGTGATTTTTTCTGCAAGGATGTCTGCGACACCTTTGACTACTTCCGCCCACTCAATATATATTATTGTATATT GTAATTTATGGAGGAGTCCC
Downstream 100 bases:
>100_bases ACGAAATGCGAGATAACACGGTTCCCCATATGACCCGTGAAGACATGGAAAAGCGAGCCAACGAAGTAGCGAATCTGCTC AAGACACTGTCGCACCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MKIVDINERLAISGQPNTDEFINFARRGYRSIINLRPDGEEPNQPGNDAEQAAARRAGLAYNFVPVIGTSITEADIQAFQ RAIATTEGSVLVHCKSGTRALMLYALSEVIDGRMKRDEVEALGHAHGFDLGRAVTWLKRQAIQTPRVSGFFDPRTGSIQY VVTDQTTKRCAIIDPVLDFDEKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTK VQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTAFVHDTIFMPDSGTARADFPGG SARALWSSIQAILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQ VNVLGGQLPEPEANGRRYLKFPLNALEGAAW
Sequences:
>Translated_431_residues MKIVDINERLAISGQPNTDEFINFARRGYRSIINLRPDGEEPNQPGNDAEQAAARRAGLAYNFVPVIGTSITEADIQAFQ RAIATTEGSVLVHCKSGTRALMLYALSEVIDGRMKRDEVEALGHAHGFDLGRAVTWLKRQAIQTPRVSGFFDPRTGSIQY VVTDQTTKRCAIIDPVLDFDEKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTK VQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTAFVHDTIFMPDSGTARADFPGG SARALWSSIQAILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQ VNVLGGQLPEPEANGRRYLKFPLNALEGAAW >Mature_431_residues MKIVDINERLAISGQPNTDEFINFARRGYRSIINLRPDGEEPNQPGNDAEQAAARRAGLAYNFVPVIGTSITEADIQAFQ RAIATTEGSVLVHCKSGTRALMLYALSEVIDGRMKRDEVEALGHAHGFDLGRAVTWLKRQAIQTPRVSGFFDPRTGSIQY VVTDQTTKRCAIIDPVLDFDEKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTK VQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTAFVHDTIFMPDSGTARADFPGG SARALWSSIQAILSLPDETRLFTGHDYQPSGRHPRWESTVGEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQ VNVLGGQLPEPEANGRRYLKFPLNALEGAAW
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=260, Percent_Identity=28.4615384615385, Blast_Score=89, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17538952, Length=274, Percent_Identity=25.9124087591241, Blast_Score=78, Evalue=9e-15, Organism=Drosophila melanogaster, GI221330176, Length=256, Percent_Identity=28.90625, Blast_Score=98, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 47372; Mature: 47372
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVDINERLAISGQPNTDEFINFARRGYRSIINLRPDGEEPNQPGNDAEQAAARRAGLA CEEEECCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCE YNFVPVIGTSITEADIQAFQRAIATTEGSVLVHCKSGTRALMLYALSEVIDGRMKRDEVE EEEHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH ALGHAHGFDLGRAVTWLKRQAIQTPRVSGFFDPRTGSIQYVVTDQTTKRCAIIDPVLDFD HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHCCC EKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTK CCCCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH VQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTAF HHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCHHEEEEECCCEEE VHDTIFMPDSGTARADFPGGSARALWSSIQAILSLPDETRLFTGHDYQPSGRHPRWESTV EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHC GEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGGQLPEPEANGRRYLK CCCHHCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE FPLNALEGAAW ECCHHHCCCCC >Mature Secondary Structure MKIVDINERLAISGQPNTDEFINFARRGYRSIINLRPDGEEPNQPGNDAEQAAARRAGLA CEEEECCCEEEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHCCCE YNFVPVIGTSITEADIQAFQRAIATTEGSVLVHCKSGTRALMLYALSEVIDGRMKRDEVE EEEHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH ALGHAHGFDLGRAVTWLKRQAIQTPRVSGFFDPRTGSIQYVVTDQTTKRCAIIDPVLDFD HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECHHHCCC EKSGATATTNADAILAHVEQQGLTVEWILDTHPHADHFSAAQYLKQRTGAPTAIGTHVTK CCCCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH VQRLWREIYNLPTLSTNGSQWDHLFADGDVFNVGSIKGRVMFSPGHTLASVTYVIGDTAF HHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCEEEECCCCCHHEEEEECCCEEE VHDTIFMPDSGTARADFPGGSARALWSSIQAILSLPDETRLFTGHDYQPSGRHPRWESTV EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHC GEQKKANLHLAGVDETTFVALREARDKTLPMPKLILHALQVNVLGGQLPEPEANGRRYLK CCCHHCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE FPLNALEGAAW ECCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]