Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682387
Identifier: 182682387
GI number: 182682387
Start: 2078949
End: 2079188
Strand: Direct
Name: 182682387
Synonym: XfasM23_1873
Alternate gene names: NA
Gene position: 2078949-2079188 (Clockwise)
Preceding gene: 182682384
Following gene: 182682396
Centisome position: 81.99
GC content: 52.92
Gene sequence:
>240_bases ATGACTTTGAACAGTGACGGCGGCGGCAGCTTGGAAACCAAAACGCCACCAGGGGTCATGCGTGGCCTTAATCGTGTTGA TGATGTAAACGCCATTAACATCAGTAATCTTGGTGAAACAACAGCCTGCGGATCGCTGACGGGAACGCGGCAACTGCGGC ACGCTTTGGTGACTGCGTTCATGGCGATATCTCAGATGGAAGGCATCAAAACTACGGGGGCAGCCCGCAAGGCATTATAA
Upstream 100 bases:
>100_bases CCAAGACGAAGATTGATAGATTTCCTGGCGTTTGCAGTGTCGGATCAAACCGCTCACAGCGGTAACGGAATTAAAGACGT TTCGCAGCCGCTCAGGGCTA
Downstream 100 bases:
>100_bases TGCCAAAAATATACAAACATTCAAGCACAATAGTATTAAATACAGAAAATCATTTAGCACTATAGAACCAACCCATCCGC CAAAACACCCTAATGCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MTLNSDGGGSLETKTPPGVMRGLNRVDDVNAINISNLGETTACGSLTGTRQLRHALVTAFMAISQMEGIKTTGAARKAL
Sequences:
>Translated_79_residues MTLNSDGGGSLETKTPPGVMRGLNRVDDVNAINISNLGETTACGSLTGTRQLRHALVTAFMAISQMEGIKTTGAARKAL >Mature_78_residues TLNSDGGGSLETKTPPGVMRGLNRVDDVNAINISNLGETTACGSLTGTRQLRHALVTAFMAISQMEGIKTTGAARKAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8190; Mature: 8058
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNSDGGGSLETKTPPGVMRGLNRVDDVNAINISNLGETTACGSLTGTRQLRHALVTAF CCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH MAISQMEGIKTTGAARKAL HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TLNSDGGGSLETKTPPGVMRGLNRVDDVNAINISNLGETTACGSLTGTRQLRHALVTAF CCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH MAISQMEGIKTTGAARKAL HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA