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The map label for this gene is cirA [C]

Identifier: 182682293

GI number: 182682293

Start: 1968467

End: 1970512

Strand: Reverse

Name: cirA [C]

Synonym: XfasM23_1776

Alternate gene names: 182682293

Gene position: 1970512-1968467 (Counterclockwise)

Preceding gene: 182682296

Following gene: 182682292

Centisome position: 77.71

GC content: 50.1

Gene sequence:

>2046_bases
ATGCTTGTCACCCATATCAGTATTTTGCCCCGCACTGTTCTTTTTCTGGCTGTTTACAATTTACTCCTCACTCCAGCGTT
GGCTATGGCTGACGTTGGACCGCCACCCACAGATTCACGTCATTTCAAAACGACAGAAGTCACGCGCCACCTCAAGGACC
TGGACGCAGTGGTTGTTACTGCTATTCCATTACGTGATAGTTATAGTGATTTGAGTCGCCCGGTTGCACTGTTGGCGGGC
GAGAGGTTGGATGAAGTACGTGCTAGTAGTCTTGGTGAGACTGTTGCCGTCTTGCCTGGTGTGCAGAGCTCAAATTTTGG
CCCTGGTGTGGGCCGCCCTATCATTCGCGGGCTGGATGGTCCGCGCATTGCTGTTCTCAATAATGGTTTGTCCTCTCAGG
ACGTGTCTACGGTTAGCCAGGATCATTCGCCAGCGGTCGAGCCATTTTTGGCTAATCAGATTGAGGTGTTGAAAGGCCCG
TCCACTTTACTATATGGTTCAGGAGCGATCGGTGGAGTAGTCAATATCGTTGATGGACGTATTGCTGAAGCGCCCGTAGG
TGGTTTCAACGGACGTGCTGAAATGCGTTTAGACGGTGGTGATAAACATGGTAATAACAACATGTTCCGCATTGATGCTG
GTAACGGGAGTGCTCTATCGGTCCATGCAGATGGCGTGTACCGTAACGAAAAGGACTATGACACCCCGAAGGGGCGGCAG
GTTAACTCGTTCATCGACACCAAATCAGGCTCGATGGGTGCTTCGTTCAGCGGTGATTTTGGTTTCTTTGGCCTGTCGGT
CGCGCGTTTTCATGACAGCTATGGCAATCCGGGTGAGCCTGGTGATCCTATCGCGGGTGACCGCGGTAGTTGGTTGCTAT
TGCATCAGGATCGTTATGATTTGAAGGCTGGTTTAACTGATCCATGGGGTGAGGCGAGTGCCCTGCGTTTCAGCCTAGGT
CACACTCAATATGATCACATTGAGTTTGAGGGAAACGAGGTCGGCACTACTTTCGGTAAGCGTGCTTCAGAGGGGCGAGT
CGAGGCCTCCTTTGCATTTGGTGGTGGCTGGCGGACTGCGTTTGGTGTGCAGGGAGGGGACTCTACTTTCCAGGCGCTTG
GTGAGGAGTCATTTGTACCAAAGACGAATAACAAATCAATTGGTGTGTTCGGATTGGCACATAACACTTTTGGGTTGTTT
CAAGTAGAATTTGGTGCGCGTGGTGATCAAGTTAAATACGATACGGATAATGGCGTTACTCGGAATTATCACCCAGGAAG
TTTTTCATTTAGTGGTGATTTAGCACTCTCTAAGCAATGGCGGCTGACTTTGAACGTGGATCATGCCGAGCGTGCTCCGG
TGGAGGAGGAACTGTTTGCCAAGGGGCCGCACATTGCGACTCTTGCTTATGAAGTTGGTCGTGCCGACCTGAATAAGGAG
AAGGCTAACCAAGCTGAGTTGGGGTTGGTATTCCGTAACGATTGGAGTGATGCCAAAGTTTCGACCTATTACAGTCGCTA
TGGCAATTTCATTTACTTAGTCGATACAGGGAGTACTTGGTTTTGGGATGATGGACAGCGTGATTTGCCGGTCCGTCAGT
GGTCGCAAGCTAATGCAATTTTTCACGGAATTGAAGGTGAGGCCACCTTTCACTTGGCTAAAAATACGAGTGGGTCTTGG
GACCTACGTGTGTTTGGTGACGGGGTTCGTGGTCGTTTGAAAGATGGAGGCAATTTGCCACGCATCGTTCCAGCACGTTA
CGGGGCGGAGCTACGTTGGGAGGACGTTGGTTGGCGTACATCGTTGGGTGCTAAGCGCTACGAGAAGCAGAACAGAGTAG
CGGTCAACGAGACTCCAACCACAGGATATACCATGGTAGATGCGCATTTGGCCTACCATATTGATGTGGATAACATTGCC
TGGGAGGTCTTTTTCGATGGTAACAATCTCACCAACTGCGATGCTCGTGTTCATACTTCCTTCCTTAAAGACGATGTCAT
GTTGGCTGGTCGTAACTATACTGTTGGTTTGCGTATGTTCTTTTAG

Upstream 100 bases:

>100_bases
TTTGCTGGGCAAGAGTATTACATCTCTAAAACCATAGATCCATCTTTCCATCAATCATAGAACGCCATTACTGGTAGCTC
ACTAACTGTACGGATTTAAT

Downstream 100 bases:

>100_bases
CGGTTATGTGCTCCTATAATCTCTTAACGGCTTTTGTTTTTAGCAGTATTAGGTGCTTGAGTCTTTAGTGTTTATTTTAT
AGCGGCGTTCTGCAAAGGGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MLVTHISILPRTVLFLAVYNLLLTPALAMADVGPPPTDSRHFKTTEVTRHLKDLDAVVVTAIPLRDSYSDLSRPVALLAG
ERLDEVRASSLGETVAVLPGVQSSNFGPGVGRPIIRGLDGPRIAVLNNGLSSQDVSTVSQDHSPAVEPFLANQIEVLKGP
STLLYGSGAIGGVVNIVDGRIAEAPVGGFNGRAEMRLDGGDKHGNNNMFRIDAGNGSALSVHADGVYRNEKDYDTPKGRQ
VNSFIDTKSGSMGASFSGDFGFFGLSVARFHDSYGNPGEPGDPIAGDRGSWLLLHQDRYDLKAGLTDPWGEASALRFSLG
HTQYDHIEFEGNEVGTTFGKRASEGRVEASFAFGGGWRTAFGVQGGDSTFQALGEESFVPKTNNKSIGVFGLAHNTFGLF
QVEFGARGDQVKYDTDNGVTRNYHPGSFSFSGDLALSKQWRLTLNVDHAERAPVEEELFAKGPHIATLAYEVGRADLNKE
KANQAELGLVFRNDWSDAKVSTYYSRYGNFIYLVDTGSTWFWDDGQRDLPVRQWSQANAIFHGIEGEATFHLAKNTSGSW
DLRVFGDGVRGRLKDGGNLPRIVPARYGAELRWEDVGWRTSLGAKRYEKQNRVAVNETPTTGYTMVDAHLAYHIDVDNIA
WEVFFDGNNLTNCDARVHTSFLKDDVMLAGRNYTVGLRMFF

Sequences:

>Translated_681_residues
MLVTHISILPRTVLFLAVYNLLLTPALAMADVGPPPTDSRHFKTTEVTRHLKDLDAVVVTAIPLRDSYSDLSRPVALLAG
ERLDEVRASSLGETVAVLPGVQSSNFGPGVGRPIIRGLDGPRIAVLNNGLSSQDVSTVSQDHSPAVEPFLANQIEVLKGP
STLLYGSGAIGGVVNIVDGRIAEAPVGGFNGRAEMRLDGGDKHGNNNMFRIDAGNGSALSVHADGVYRNEKDYDTPKGRQ
VNSFIDTKSGSMGASFSGDFGFFGLSVARFHDSYGNPGEPGDPIAGDRGSWLLLHQDRYDLKAGLTDPWGEASALRFSLG
HTQYDHIEFEGNEVGTTFGKRASEGRVEASFAFGGGWRTAFGVQGGDSTFQALGEESFVPKTNNKSIGVFGLAHNTFGLF
QVEFGARGDQVKYDTDNGVTRNYHPGSFSFSGDLALSKQWRLTLNVDHAERAPVEEELFAKGPHIATLAYEVGRADLNKE
KANQAELGLVFRNDWSDAKVSTYYSRYGNFIYLVDTGSTWFWDDGQRDLPVRQWSQANAIFHGIEGEATFHLAKNTSGSW
DLRVFGDGVRGRLKDGGNLPRIVPARYGAELRWEDVGWRTSLGAKRYEKQNRVAVNETPTTGYTMVDAHLAYHIDVDNIA
WEVFFDGNNLTNCDARVHTSFLKDDVMLAGRNYTVGLRMFF
>Mature_681_residues
MLVTHISILPRTVLFLAVYNLLLTPALAMADVGPPPTDSRHFKTTEVTRHLKDLDAVVVTAIPLRDSYSDLSRPVALLAG
ERLDEVRASSLGETVAVLPGVQSSNFGPGVGRPIIRGLDGPRIAVLNNGLSSQDVSTVSQDHSPAVEPFLANQIEVLKGP
STLLYGSGAIGGVVNIVDGRIAEAPVGGFNGRAEMRLDGGDKHGNNNMFRIDAGNGSALSVHADGVYRNEKDYDTPKGRQ
VNSFIDTKSGSMGASFSGDFGFFGLSVARFHDSYGNPGEPGDPIAGDRGSWLLLHQDRYDLKAGLTDPWGEASALRFSLG
HTQYDHIEFEGNEVGTTFGKRASEGRVEASFAFGGGWRTAFGVQGGDSTFQALGEESFVPKTNNKSIGVFGLAHNTFGLF
QVEFGARGDQVKYDTDNGVTRNYHPGSFSFSGDLALSKQWRLTLNVDHAERAPVEEELFAKGPHIATLAYEVGRADLNKE
KANQAELGLVFRNDWSDAKVSTYYSRYGNFIYLVDTGSTWFWDDGQRDLPVRQWSQANAIFHGIEGEATFHLAKNTSGSW
DLRVFGDGVRGRLKDGGNLPRIVPARYGAELRWEDVGWRTSLGAKRYEKQNRVAVNETPTTGYTMVDAHLAYHIDVDNIA
WEVFFDGNNLTNCDARVHTSFLKDDVMLAGRNYTVGLRMFF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 74320; Mature: 74320

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTHISILPRTVLFLAVYNLLLTPALAMADVGPPPTDSRHFKTTEVTRHLKDLDAVVVT
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCEEEEE
AIPLRDSYSDLSRPVALLAGERLDEVRASSLGETVAVLPGVQSSNFGPGVGRPIIRGLDG
EEECCCCHHHHHCCHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCC
PRIAVLNNGLSSQDVSTVSQDHSPAVEPFLANQIEVLKGPSTLLYGSGAIGGVVNIVDGR
CEEEEEECCCCCCCHHHHHCCCCCCCCHHHHCCEEEECCCCEEEEECCCCCCEEEECCCC
IAEAPVGGFNGRAEMRLDGGDKHGNNNMFRIDAGNGSALSVHADGVYRNEKDYDTPKGRQ
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEECCCCCCCCCCCCE
VNSFIDTKSGSMGASFSGDFGFFGLSVARFHDSYGNPGEPGDPIAGDRGSWLLLHQDRYD
EHHHHCCCCCCCCCCCCCCCCHHHEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCH
LKAGLTDPWGEASALRFSLGHTQYDHIEFEGNEVGTTFGKRASEGRVEASFAFGGGWRTA
HCCCCCCCCCCCCEEEEECCCCEECEEEECCCEECCHHCCCCCCCCEEEEEEECCCCEEE
FGVQGGDSTFQALGEESFVPKTNNKSIGVFGLAHNTFGLFQVEFGARGDQVKYDTDNGVT
EECCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCC
RNYHPGSFSFSGDLALSKQWRLTLNVDHAERAPVEEELFAKGPHIATLAYEVGRADLNKE
CCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHH
KANQAELGLVFRNDWSDAKVSTYYSRYGNFIYLVDTGSTWFWDDGQRDLPVRQWSQANAI
HCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCHHHHCCCCCE
FHGIEGEATFHLAKNTSGSWDLRVFGDGVRGRLKDGGNLPRIVPARYGAELRWEDVGWRT
EECCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCEEEHHCCCCEEEEECCCCCC
SLGAKRYEKQNRVAVNETPTTGYTMVDAHLAYHIDVDNIAWEVFFDGNNLTNCDARVHTS
CCCHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHH
FLKDDVMLAGRNYTVGLRMFF
HHCCCEEEECCCEEEEEEEEC
>Mature Secondary Structure
MLVTHISILPRTVLFLAVYNLLLTPALAMADVGPPPTDSRHFKTTEVTRHLKDLDAVVVT
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCEEEEE
AIPLRDSYSDLSRPVALLAGERLDEVRASSLGETVAVLPGVQSSNFGPGVGRPIIRGLDG
EEECCCCHHHHHCCHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCC
PRIAVLNNGLSSQDVSTVSQDHSPAVEPFLANQIEVLKGPSTLLYGSGAIGGVVNIVDGR
CEEEEEECCCCCCCHHHHHCCCCCCCCHHHHCCEEEECCCCEEEEECCCCCCEEEECCCC
IAEAPVGGFNGRAEMRLDGGDKHGNNNMFRIDAGNGSALSVHADGVYRNEKDYDTPKGRQ
CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEECCCCCCCCCCCCE
VNSFIDTKSGSMGASFSGDFGFFGLSVARFHDSYGNPGEPGDPIAGDRGSWLLLHQDRYD
EHHHHCCCCCCCCCCCCCCCCHHHEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEECCCCH
LKAGLTDPWGEASALRFSLGHTQYDHIEFEGNEVGTTFGKRASEGRVEASFAFGGGWRTA
HCCCCCCCCCCCCEEEEECCCCEECEEEECCCEECCHHCCCCCCCCEEEEEEECCCCEEE
FGVQGGDSTFQALGEESFVPKTNNKSIGVFGLAHNTFGLFQVEFGARGDQVKYDTDNGVT
EECCCCCHHHHHCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCCCCC
RNYHPGSFSFSGDLALSKQWRLTLNVDHAERAPVEEELFAKGPHIATLAYEVGRADLNKE
CCCCCCCCCCCCCEEECCEEEEEEEECCCCCCCCHHHHHHCCCCEEEEEEECCCCCCCHH
KANQAELGLVFRNDWSDAKVSTYYSRYGNFIYLVDTGSTWFWDDGQRDLPVRQWSQANAI
HCCCCEEEEEEECCCCCCHHHHHHHHHCCEEEEEECCCEEEECCCCCCCCHHHHCCCCCE
FHGIEGEATFHLAKNTSGSWDLRVFGDGVRGRLKDGGNLPRIVPARYGAELRWEDVGWRT
EECCCCCEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCEEEHHCCCCEEEEECCCCCC
SLGAKRYEKQNRVAVNETPTTGYTMVDAHLAYHIDVDNIAWEVFFDGNNLTNCDARVHTS
CCCHHHHHHCCCEEEECCCCCCEEEEEEEEEEEEEECCEEEEEEECCCCCCCCCHHHHHH
FLKDDVMLAGRNYTVGLRMFF
HHCCCEEEECCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]