Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yfgM [C]
Identifier: 182682231
GI number: 182682231
Start: 1893366
End: 1894004
Strand: Reverse
Name: yfgM [C]
Synonym: XfasM23_1713
Alternate gene names: 182682231
Gene position: 1894004-1893366 (Counterclockwise)
Preceding gene: 182682232
Following gene: 182682230
Centisome position: 74.69
GC content: 51.49
Gene sequence:
>639_bases ATGGCGATCGGTGATTTGCACGATGAACAGGAACATGGCGAACGCATTCGCTCTTGGTTACGTAAGAATGGTGTTGGCTT GTTATGTGGTGTGTTACTTGGTTTTGTTTTTATTGCAGCTTGGCAATGGAGGGAGGCCAAGCAGGTCGACCAATTCACCT CTGCTGCGCAGCAGTTCGCCGTTTTCGGTAAATTGCTCCAGGCTAAAGAGTTGGGTAATGCTGCCCAGGCGCTGGCTAAA CTCAATGGTGCGCCTTCTGGGTTGTATGCTGAGCTTGGCGCATTGCAGTTGGCTAAAGCTCAATCAGAGGCTGGTAACAC TGCTGAGGCGATCAAGATCCTGCGTACCTTGCCGGTCGATAGTCAATTCAAGTTGATTGCTGATCAACGTTTGGCGCGTT TGCTGGTTGCCACTGGTAAGGCCGATGAGGCAAACAAACTCCTGGCTACTCGCAATGATGATGTCAGCTTTGAGATTCAA GGTGACGCCTTGTTAGTGCTTGGCAAGCGTGAACAGGCACGCGAGCGTTATGCCAAAGCACTTGCCATGGGCGATAGTGC AGCGCCGCAGCGCCGTATTCTGGAAATTAAGTTGATGGATGTGGGCGGCACATTACCCACTCCTGTGGGTCCGATTTAA
Upstream 100 bases:
>100_bases TGTGATGCCGGTTCCCAGATAAAACACAGTACACAGCGCTAGCGTTTTCCGTTTCTAAATTGCATAGCTCCTGCTGGAGC GCGTGGTCTTGAGGGTATTG
Downstream 100 bases:
>100_bases ATGAGAGATGTTATGAAGTTCAGGAAATTTTTCACAATTGCATTATTCGCTACCGTTTTTGTTGGGTGTGGCAGTGTAAA AAGTGTGTTTCGCGGTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAIGDLHDEQEHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKELGNAAQALAK LNGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTLPVDSQFKLIADQRLARLLVATGKADEANKLLATRNDDVSFEIQ GDALLVLGKREQARERYAKALAMGDSAAPQRRILEIKLMDVGGTLPTPVGPI
Sequences:
>Translated_212_residues MAIGDLHDEQEHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKELGNAAQALAK LNGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTLPVDSQFKLIADQRLARLLVATGKADEANKLLATRNDDVSFEIQ GDALLVLGKREQARERYAKALAMGDSAAPQRRILEIKLMDVGGTLPTPVGPI >Mature_211_residues AIGDLHDEQEHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFAVFGKLLQAKELGNAAQALAKL NGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTLPVDSQFKLIADQRLARLLVATGKADEANKLLATRNDDVSFEIQG DALLVLGKREQARERYAKALAMGDSAAPQRRILEIKLMDVGGTLPTPVGPI
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22899; Mature: 22767
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGDLHDEQEHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFA CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VFGKLLQAKELGNAAQALAKLNGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTLPVD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC SQFKLIADQRLARLLVATGKADEANKLLATRNDDVSFEIQGDALLVLGKREQARERYAKA CHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCEEEEECCCEEEEECCHHHHHHHHHHH LAMGDSAAPQRRILEIKLMDVGGTLPTPVGPI HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure AIGDLHDEQEHGERIRSWLRKNGVGLLCGVLLGFVFIAAWQWREAKQVDQFTSAAQQFA CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH VFGKLLQAKELGNAAQALAKLNGAPSGLYAELGALQLAKAQSEAGNTAEAIKILRTLPVD HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC SQFKLIADQRLARLLVATGKADEANKLLATRNDDVSFEIQGDALLVLGKREQARERYAKA CHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCEEEEECCCEEEEECCHHHHHHHHHHH LAMGDSAAPQRRILEIKLMDVGGTLPTPVGPI HHCCCCCCCCCEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA