Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is yfgA [C]
Identifier: 182682232
GI number: 182682232
Start: 1894083
End: 1894949
Strand: Reverse
Name: yfgA [C]
Synonym: XfasM23_1714
Alternate gene names: 182682232
Gene position: 1894949-1894083 (Counterclockwise)
Preceding gene: 182682233
Following gene: 182682231
Centisome position: 74.73
GC content: 54.09
Gene sequence:
>867_bases GTGATCAGTGATTTCGATCCTAACCCTTCCGAGCATGATTCGAATCCTGACCCTTTTGAACATGCGAAAGGATGTGGACA ACGTTTACGTGATGCGCGAATGGCGGTTGGCTTGACTGTTGAAGATGTCGCAACCAGCCTGCGCATGCCGATACAGATAG TGCGTTCATTAGAGGAGGAAAACTGGCAGCGTCTAGGTGCGCCGGTATTCGTCCGTGGTCAGTTACGCGGTTATGCGCGG TTTTTGAATATAGATCTTGATCCATTGCTTGAACAGGCGTTCTCGGCTGAAATCGAACCAGCCGAATTGGTGAGTTATGC GCATATGCAACGCGGGAGGCACTTGCTTGAGAGCGTCACCCGCAAAGCAATGTATGTGGTCATCACCGGTGTGCTTGCTG TGCCGGTATGGTATGCAATGCGCAGCAGTTTTGAGCCGCGTGTGCCACGGACTGCTTCGTTGGAGGTGGTGCCTGAGCAA TCAAAGTCCGAGGCTTTGGGTGGTACCTCGCCTGACTCGGGGGGTAGTTCCGATAGTACTGCGCCGTTTATCGCCTCGAT TGCCCCAGTGCCGCGTAACAACGCAATGCCTTCGGAGCAAGGGGGGGGGTTAACGCTGAGCTTCAAGGGCGATAGCTGGA TAGAGGTGGTTGCTCCCGATGGAAGCCCGATAGAGAAAGCATTAATCCCTGCTGGGCAAGTACGCCATTATGTGCTTGGC CAAGTGGGGCGTGTCGTGCTGGGTAATGCCGTTGCGGTGGAAGTGCAAGAATCTGGGAACATTGTTGATCTAACACGCTA CAGGCGCGCTAATGTGGCACGTTTTGCGGTATCCTCCGATGGCTCTGTGATGCCGGTTCCCAGATAA
Upstream 100 bases:
>100_bases GCAAGAGCTAGGAGACAGGGCAGCTGCTAGCCGATATCAACAGCGGTTAGTCAAGGAGTTTCCCGAGACTGTAGCCGTCG AACCCAGGGGCTAATGTATT
Downstream 100 bases:
>100_bases AACACAGTACACAGCGCTAGCGTTTTCCGTTTCTAAATTGCATAGCTCCTGCTGGAGCGCGTGGTCTTGAGGGTATTGAT GGCGATCGGTGATTTGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MISDFDPNPSEHDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEENWQRLGAPVFVRGQLRGYAR FLNIDLDPLLEQAFSAEIEPAELVSYAHMQRGRHLLESVTRKAMYVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQ SKSEALGGTSPDSGGSSDSTAPFIASIAPVPRNNAMPSEQGGGLTLSFKGDSWIEVVAPDGSPIEKALIPAGQVRHYVLG QVGRVVLGNAVAVEVQESGNIVDLTRYRRANVARFAVSSDGSVMPVPR
Sequences:
>Translated_288_residues MISDFDPNPSEHDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEENWQRLGAPVFVRGQLRGYAR FLNIDLDPLLEQAFSAEIEPAELVSYAHMQRGRHLLESVTRKAMYVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQ SKSEALGGTSPDSGGSSDSTAPFIASIAPVPRNNAMPSEQGGGLTLSFKGDSWIEVVAPDGSPIEKALIPAGQVRHYVLG QVGRVVLGNAVAVEVQESGNIVDLTRYRRANVARFAVSSDGSVMPVPR >Mature_288_residues MISDFDPNPSEHDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEENWQRLGAPVFVRGQLRGYAR FLNIDLDPLLEQAFSAEIEPAELVSYAHMQRGRHLLESVTRKAMYVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQ SKSEALGGTSPDSGGSSDSTAPFIASIAPVPRNNAMPSEQGGGLTLSFKGDSWIEVVAPDGSPIEKALIPAGQVRHYVLG QVGRVVLGNAVAVEVQESGNIVDLTRYRRANVARFAVSSDGSVMPVPR
Specific function: Unknown
COG id: COG1426
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31231; Mature: 31231
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDFDPNPSEHDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NWQRLGAPVFVRGQLRGYARFLNIDLDPLLEQAFSAEIEPAELVSYAHMQRGRHLLESVT HHHHCCCCEEEECCHHCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RKAMYVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQSKSEALGGTSPDSGGSSDST HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCC APFIASIAPVPRNNAMPSEQGGGLTLSFKGDSWIEVVAPDGSPIEKALIPAGQVRHYVLG CCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHH QVGRVVLGNAVAVEVQESGNIVDLTRYRRANVARFAVSSDGSVMPVPR HHHHHHCCCEEEEEECCCCCEEEEHHHHHCCCEEEEECCCCCEECCCC >Mature Secondary Structure MISDFDPNPSEHDSNPDPFEHAKGCGQRLRDARMAVGLTVEDVATSLRMPIQIVRSLEEE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH NWQRLGAPVFVRGQLRGYARFLNIDLDPLLEQAFSAEIEPAELVSYAHMQRGRHLLESVT HHHHCCCCEEEECCHHCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RKAMYVVITGVLAVPVWYAMRSSFEPRVPRTASLEVVPEQSKSEALGGTSPDSGGSSDST HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHCCCCCCCCCCCCCCCC APFIASIAPVPRNNAMPSEQGGGLTLSFKGDSWIEVVAPDGSPIEKALIPAGQVRHYVLG CCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHCCHHHHHHHHHH QVGRVVLGNAVAVEVQESGNIVDLTRYRRANVARFAVSSDGSVMPVPR HHHHHHCCCEEEEEECCCCCEEEEHHHHHCCCEEEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA