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The map label for this gene is 182682131

Identifier: 182682131

GI number: 182682131

Start: 1784206

End: 1784868

Strand: Direct

Name: 182682131

Synonym: XfasM23_1609

Alternate gene names: NA

Gene position: 1784206-1784868 (Clockwise)

Preceding gene: 182682130

Following gene: 182682134

Centisome position: 70.36

GC content: 50.98

Gene sequence:

>663_bases
ATGTTTCCGAAACTGCCTACCGTCACCAAAGGTCTACTACTCACCAACGTCGTTATTTTCCTATTTCAGATGATGTTGGG
TGAGAACACCTTCGCAACACTGATGCTGTGGCCGCTAGGCGGTAACAGCTTCGAAACATTGATATCAGGTGCCAGCTTCA
TGCCTTGGCAGTTGCTGACCTACGGATTTCTGCATGAGGGTTTTCAACACCTATTCTTCAATATGCTCGCAGTCTTCATG
TTCGGTGCGGCACTGGAGCATACCTGGGGTGAGAAGCGCTTTTTGACGTATTACCTGGTGTGTGTCGCCGGTGCTGGCGT
ATGCCAGCTATTGGTCAGTTGGCTGCTGAGCAGTGGTACGCCAGTGCTTGGTTCGTCCGGTGGCGTGTTCGGTTTATTGA
TGGCCTACGGGATGCTATTTCCCGATGAACGTATCTTGCTGGTTTTTCCACCGATTCCTATGAAAGCAAGAACCTTTGTG
ATTTTATACGGTGTCATCGAATTGCTCATGGGCATCACTGGCATACAACCCAACGTCGCACATTTCACACATCTAGGTGG
CATGCTGTTTGGCTGGTTACTGATCCGCTACTGGCGTGGGCAACCCCCGTTCGGTGGTAGCGGACGTAAACCCAAGCCAC
CTTACATCCGTATGGTGCCCTGA

Upstream 100 bases:

>100_bases
ACACACGATCACGCATCTTCTGACACCTGAAACACAGCAATGTTAGGCGCTTCAATAACGAGCTAGTTATGATGGCGGCA
ATTTCTGGGGGAAGCCTTCC

Downstream 100 bases:

>100_bases
CCATCAATGGCCAGAAAATAAAGTACGTTGCAGTGGGGTTTAAGGAATGGAATCACTGCACACGTGTCATCACCAGCTGC
CAAGTGGAGTGACATGGCGT

Product: rhomboid family protein

Products: NA

Alternate protein names: Transmembrane Rhomboid Family Protein; Peptidase; Integral Membrane Protein; Cytoplasmic Membrane Protein; Rhomboid-Like Protein; Peptidase Protein; Serine Protease

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MFPKLPTVTKGLLLTNVVIFLFQMMLGENTFATLMLWPLGGNSFETLISGASFMPWQLLTYGFLHEGFQHLFFNMLAVFM
FGAALEHTWGEKRFLTYYLVCVAGAGVCQLLVSWLLSSGTPVLGSSGGVFGLLMAYGMLFPDERILLVFPPIPMKARTFV
ILYGVIELLMGITGIQPNVAHFTHLGGMLFGWLLIRYWRGQPPFGGSGRKPKPPYIRMVP

Sequences:

>Translated_220_residues
MFPKLPTVTKGLLLTNVVIFLFQMMLGENTFATLMLWPLGGNSFETLISGASFMPWQLLTYGFLHEGFQHLFFNMLAVFM
FGAALEHTWGEKRFLTYYLVCVAGAGVCQLLVSWLLSSGTPVLGSSGGVFGLLMAYGMLFPDERILLVFPPIPMKARTFV
ILYGVIELLMGITGIQPNVAHFTHLGGMLFGWLLIRYWRGQPPFGGSGRKPKPPYIRMVP
>Mature_220_residues
MFPKLPTVTKGLLLTNVVIFLFQMMLGENTFATLMLWPLGGNSFETLISGASFMPWQLLTYGFLHEGFQHLFFNMLAVFM
FGAALEHTWGEKRFLTYYLVCVAGAGVCQLLVSWLLSSGTPVLGSSGGVFGLLMAYGMLFPDERILLVFPPIPMKARTFV
ILYGVIELLMGITGIQPNVAHFTHLGGMLFGWLLIRYWRGQPPFGGSGRKPKPPYIRMVP

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24522; Mature: 24522

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPKLPTVTKGLLLTNVVIFLFQMMLGENTFATLMLWPLGGNSFETLISGASFMPWQLLT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHHH
YGFLHEGFQHLFFNMLAVFMFGAALEHTWGEKRFLTYYLVCVAGAGVCQLLVSWLLSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PVLGSSGGVFGLLMAYGMLFPDERILLVFPPIPMKARTFVILYGVIELLMGITGIQPNVA
CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
HFTHLGGMLFGWLLIRYWRGQPPFGGSGRKPKPPYIRMVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure
MFPKLPTVTKGLLLTNVVIFLFQMMLGENTFATLMLWPLGGNSFETLISGASFMPWQLLT
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCCCHHHHHH
YGFLHEGFQHLFFNMLAVFMFGAALEHTWGEKRFLTYYLVCVAGAGVCQLLVSWLLSSGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
PVLGSSGGVFGLLMAYGMLFPDERILLVFPPIPMKARTFVILYGVIELLMGITGIQPNVA
CCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHH
HFTHLGGMLFGWLLIRYWRGQPPFGGSGRKPKPPYIRMVP
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA