Click here to switch to the map view.

The map label for this gene is yxaH [H]

Identifier: 182682130

GI number: 182682130

Start: 1782472

End: 1783764

Strand: Direct

Name: yxaH [H]

Synonym: XfasM23_1608

Alternate gene names: 182682130

Gene position: 1782472-1783764 (Clockwise)

Preceding gene: 182682129

Following gene: 182682131

Centisome position: 70.3

GC content: 53.75

Gene sequence:

>1293_bases
ATGACTGCTCCGTTGCAGAACACTACGTTATCTATGGTGTGTATGTCCTCTGCCACTCCTCCGCTACTCCCTATTGCCCA
GAGCGAACGCATCGCGATACTCGACATCCTGCGTGGTTGTGCGTTAATCGGCATTTTGCTCATGAATATTGAATGCTTCG
TGGGGCCGCTGGATGCTGGTACCACTGGCATTGATCCACAGTTGACCGGAATGGACCGCATCGCCGACGCTCTGATCTAC
GTGTTGATCCAAGGGAAGTTCTACACGCTGTTCTCACTCCTGTTCGGTATGGGATTCGCGGTGATGAGCAAGCGCGCCGC
AGACGTCGGCCGCGCATTCATGCCGTTCTATTTACGACGCAGCTTAGGATTGTTGACAATCGGACTCATCCACGCGGTAT
TGATCTGGTCCGGGGACATCTTGGTGCTGTACGCACTGATGTCATTGCCGCTGTTAATGTCACGTAGGTTACCCACCGCA
GCGCTGCCACTCACCGGGACGTTGTTGTATCTAATACCTGTGGCGCTGATGTCAATATACTGCTGGGCGGATTTTATCGT
CTCGACAAGCTCCAATAGCGCGAACATCAAAAGCTGGCAAGAAGTATTGGCACAGAACGGCACCGAGACGGCACAGTTAA
TACGCGAACAGCGCCACGCCTACGGTGCTGGCAGTTATGTGCAAGCCACCGTACAACGTCTGCATGATGTAAAAAATGGC
CTGGAATCGCTCATCATCAACGGCGTACATGTGTTAGGCATGTTTTTGTTGGGAACGTGGTTTGTACGCAGCGGTGCGAT
TCTGCAACCAGAACGCTATACGCGTTTGTTCGCTTGGCTGCGTTGGGGTGCATGGCCGTTAGGGTTAACGGCTATGCTGC
TCAGCGTTCATCTGGCTTCTTGGCAGGATGTGACTCGGGTCGACCCACGGGCATTCAGTGCATTTGCGCTGAGCATGATC
GCCGGGTTGTTGATGTGTCTGGGTTATCTGGCTTGGGGGATACGTGCCGCCTTTGCCTTGACTTGGGCCGCACCCGCAGG
ACGCATGGCGTTAAGCAATTACTTGCTACAGTCGATGGTCTGTACGCTGATCTTTTATGGGTATGGTCTTGGTTTTTTTG
AGCGCTTACCGCGGGTTTGGCAGCTCCCATTTGCAATCGCACTGTTCACCTTTCAAGTGGCCTTAAGCCGATGGTGGCTG
CAACGCTTCCGCTTCGGTCCCTGTGAATGGCTATGGCGCAGTTTTACCTACCTACGCTGGGAACCATTACGCGTAGCCAG
CACTGCACGCTGA

Upstream 100 bases:

>100_bases
AGATCGTTGAGGTGCGCGAGGCGACTCAAGAAGAAATCGAGCACGGCCACGTGCATGGTGAGGGTGGTCACCTGCACTGA
CGCTTGGCCAGCTATCCTGC

Downstream 100 bases:

>100_bases
ATCACATCCGTTATACAGCAGGCAAGGACATCGCACCGGGGCTGCAGCTGTTCATATGATGACTCTCCGCACCAACGGAT
GCTGTGCATGAAAAAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTAPLQNTTLSMVCMSSATPPLLPIAQSERIAILDILRGCALIGILLMNIECFVGPLDAGTTGIDPQLTGMDRIADALIY
VLIQGKFYTLFSLLFGMGFAVMSKRAADVGRAFMPFYLRRSLGLLTIGLIHAVLIWSGDILVLYALMSLPLLMSRRLPTA
ALPLTGTLLYLIPVALMSIYCWADFIVSTSSNSANIKSWQEVLAQNGTETAQLIREQRHAYGAGSYVQATVQRLHDVKNG
LESLIINGVHVLGMFLLGTWFVRSGAILQPERYTRLFAWLRWGAWPLGLTAMLLSVHLASWQDVTRVDPRAFSAFALSMI
AGLLMCLGYLAWGIRAAFALTWAAPAGRMALSNYLLQSMVCTLIFYGYGLGFFERLPRVWQLPFAIALFTFQVALSRWWL
QRFRFGPCEWLWRSFTYLRWEPLRVASTAR

Sequences:

>Translated_430_residues
MTAPLQNTTLSMVCMSSATPPLLPIAQSERIAILDILRGCALIGILLMNIECFVGPLDAGTTGIDPQLTGMDRIADALIY
VLIQGKFYTLFSLLFGMGFAVMSKRAADVGRAFMPFYLRRSLGLLTIGLIHAVLIWSGDILVLYALMSLPLLMSRRLPTA
ALPLTGTLLYLIPVALMSIYCWADFIVSTSSNSANIKSWQEVLAQNGTETAQLIREQRHAYGAGSYVQATVQRLHDVKNG
LESLIINGVHVLGMFLLGTWFVRSGAILQPERYTRLFAWLRWGAWPLGLTAMLLSVHLASWQDVTRVDPRAFSAFALSMI
AGLLMCLGYLAWGIRAAFALTWAAPAGRMALSNYLLQSMVCTLIFYGYGLGFFERLPRVWQLPFAIALFTFQVALSRWWL
QRFRFGPCEWLWRSFTYLRWEPLRVASTAR
>Mature_429_residues
TAPLQNTTLSMVCMSSATPPLLPIAQSERIAILDILRGCALIGILLMNIECFVGPLDAGTTGIDPQLTGMDRIADALIYV
LIQGKFYTLFSLLFGMGFAVMSKRAADVGRAFMPFYLRRSLGLLTIGLIHAVLIWSGDILVLYALMSLPLLMSRRLPTAA
LPLTGTLLYLIPVALMSIYCWADFIVSTSSNSANIKSWQEVLAQNGTETAQLIREQRHAYGAGSYVQATVQRLHDVKNGL
ESLIINGVHVLGMFLLGTWFVRSGAILQPERYTRLFAWLRWGAWPLGLTAMLLSVHLASWQDVTRVDPRAFSAFALSMIA
GLLMCLGYLAWGIRAAFALTWAAPAGRMALSNYLLQSMVCTLIFYGYGLGFFERLPRVWQLPFAIALFTFQVALSRWWLQ
RFRFGPCEWLWRSFTYLRWEPLRVASTAR

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788475, Length=417, Percent_Identity=32.1342925659472, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 48031; Mature: 47899

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPLQNTTLSMVCMSSATPPLLPIAQSERIAILDILRGCALIGILLMNIECFVGPLDAG
CCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC
TTGIDPQLTGMDRIADALIYVLIQGKFYTLFSLLFGMGFAVMSKRAADVGRAFMPFYLRR
CCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLGLLTIGLIHAVLIWSGDILVLYALMSLPLLMSRRLPTAALPLTGTLLYLIPVALMSIY
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
CWADFIVSTSSNSANIKSWQEVLAQNGTETAQLIREQRHAYGAGSYVQATVQRLHDVKNG
HHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
LESLIINGVHVLGMFLLGTWFVRSGAILQPERYTRLFAWLRWGAWPLGLTAMLLSVHLAS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
WQDVTRVDPRAFSAFALSMIAGLLMCLGYLAWGIRAAFALTWAAPAGRMALSNYLLQSMV
CHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
CTLIFYGYGLGFFERLPRVWQLPFAIALFTFQVALSRWWLQRFRFGPCEWLWRSFTYLRW
HHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
EPLRVASTAR
CCHHHCCCCC
>Mature Secondary Structure 
TAPLQNTTLSMVCMSSATPPLLPIAQSERIAILDILRGCALIGILLMNIECFVGPLDAG
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCC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CCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]