Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682117
Identifier: 182682117
GI number: 182682117
Start: 1771706
End: 1771840
Strand: Reverse
Name: 182682117
Synonym: XfasM23_1595
Alternate gene names: NA
Gene position: 1771840-1771706 (Counterclockwise)
Preceding gene: 182682118
Following gene: 182682116
Centisome position: 69.88
GC content: 40.74
Gene sequence:
>135_bases ATGATGAGTAATAATATATCTGTTCAGATTAAGTATGATGTTGGTGGTCAAGATGGTATTCCACATACTTTCATTGTGAT TACCTTGCCCGATGGGAGTGAGCGTGAGTATGGATATGCACCCGCATGCGTATGA
Upstream 100 bases:
>100_bases TGCATACAACAGTGATGATCTCATTTTACAATAAAACGAAAGATGAGATGGAAAATATTTATAAGATGATTTTTGTGTCC CCATATTATAGAAAGGATTT
Downstream 100 bases:
>100_bases CAAAATTAAGAGCTTTAATAATACTCTTCGTGGTATTGGTTGTTCTTCCAGCCTTCCTTCTCGCCCTCTTTGTGATCTAT TTAAAACTCCAGGGTAATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MMSNNISVQIKYDVGGQDGIPHTFIVITLPDGSEREYGYAPACV
Sequences:
>Translated_44_residues MMSNNISVQIKYDVGGQDGIPHTFIVITLPDGSEREYGYAPACV >Mature_44_residues MMSNNISVQIKYDVGGQDGIPHTFIVITLPDGSEREYGYAPACV
Specific function: Unknown
COG id: COG2931
COG function: function code Q; RTX toxins and related Ca2+-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4787; Mature: 4787
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSNNISVQIKYDVGGQDGIPHTFIVITLPDGSEREYGYAPACV CCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MMSNNISVQIKYDVGGQDGIPHTFIVITLPDGSEREYGYAPACV CCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA