Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682118
Identifier: 182682118
GI number: 182682118
Start: 1771837
End: 1772253
Strand: Reverse
Name: 182682118
Synonym: XfasM23_1596
Alternate gene names: NA
Gene position: 1772253-1771837 (Counterclockwise)
Preceding gene: 182682119
Following gene: 182682117
Centisome position: 69.89
GC content: 34.53
Gene sequence:
>417_bases ATGTGGGTATCTATAATGTTTATTCGACGCTTAAGAAAAATTTTTATTTTATCTATTCTTGTTGCAGGAGGTAGTTTGCT TTCAGGGTGTGGTATGAATTCGGTAGAAGGTTCAGGTGAAATCAACATGGCAGCCCATGATGCTTTGGCAGAGACTGGGC TCTGCCAAACTAATATGGATTGCAGGAATAAATGTCTTGTATTTTGGGATGGAAATGAGAAAAGAGTGTATCTTAATTTT TATGTTGGCTCAAAGAAGGTTAATCCATCGTTGATCGAAAAGGCAATTTTGAAAAGGAAAGAAGAAATTGGCATGCATAC AACAGTGATGATCTCATTTTACAATAAAACGAAAGATGAGATGGAAAATATTTATAAGATGATTTTTGTGTCCCCATATT ATAGAAAGGATTTATGA
Upstream 100 bases:
>100_bases TCAGATGGATGACAGTACTTTCAATGAGTGGAGCGAAGTATTGAAAGCTGGGTCTTTGGCATTTATTCAAGAGTATGAAA GATAGTAAATTAAATCTTTA
Downstream 100 bases:
>100_bases TGAGTAATAATATATCTGTTCAGATTAAGTATGATGTTGGTGGTCAAGATGGTATTCCACATACTTTCATTGTGATTACC TTGCCCGATGGGAGTGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MWVSIMFIRRLRKIFILSILVAGGSLLSGCGMNSVEGSGEINMAAHDALAETGLCQTNMDCRNKCLVFWDGNEKRVYLNF YVGSKKVNPSLIEKAILKRKEEIGMHTTVMISFYNKTKDEMENIYKMIFVSPYYRKDL
Sequences:
>Translated_138_residues MWVSIMFIRRLRKIFILSILVAGGSLLSGCGMNSVEGSGEINMAAHDALAETGLCQTNMDCRNKCLVFWDGNEKRVYLNF YVGSKKVNPSLIEKAILKRKEEIGMHTTVMISFYNKTKDEMENIYKMIFVSPYYRKDL >Mature_138_residues MWVSIMFIRRLRKIFILSILVAGGSLLSGCGMNSVEGSGEINMAAHDALAETGLCQTNMDCRNKCLVFWDGNEKRVYLNF YVGSKKVNPSLIEKAILKRKEEIGMHTTVMISFYNKTKDEMENIYKMIFVSPYYRKDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15820; Mature: 15820
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWVSIMFIRRLRKIFILSILVAGGSLLSGCGMNSVEGSGEINMAAHDALAETGLCQTNMD CEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCC CRNKCLVFWDGNEKRVYLNFYVGSKKVNPSLIEKAILKRKEEIGMHTTVMISFYNKTKDE CCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH MENIYKMIFVSPYYRKDL HHHHHHHHHCCCHHHCCC >Mature Secondary Structure MWVSIMFIRRLRKIFILSILVAGGSLLSGCGMNSVEGSGEINMAAHDALAETGLCQTNMD CEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEHHHHHHHHHCCCCCCCCC CRNKCLVFWDGNEKRVYLNFYVGSKKVNPSLIEKAILKRKEEIGMHTTVMISFYNKTKDE CCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHH MENIYKMIFVSPYYRKDL HHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA