Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682116
Identifier: 182682116
GI number: 182682116
Start: 1771284
End: 1771709
Strand: Reverse
Name: 182682116
Synonym: XfasM23_1594
Alternate gene names: NA
Gene position: 1771709-1771284 (Counterclockwise)
Preceding gene: 182682117
Following gene: 182682115
Centisome position: 69.87
GC content: 35.21
Gene sequence:
>426_bases ATGACAAAATTAAGAGCTTTAATAATACTCTTCGTGGTATTGGTTGTTCTTCCAGCCTTCCTTCTCGCCCTCTTTGTGAT CTATTTAAAACTCCAGGGTAATACATATTATCTTAGTATCAAAAATTTAACGAATCATTCTATCTATATCAAGGAGGTAT TGGCAGATGATAGATCTGTTGGATTGAAAGAATTTACCGTTGGCCCCACTGAAATTTATTTAAATTATTTTCATGGCGTA TTTAAATCGAAAAAGGTAGAGACAATGACGTTTAAAATCATTGATGAGAACAAAAATGCAGCTTCTTTGAGCTGCTCTCT GAAAGTGCCTTATGAGGGAATAAAGAACTGTCTTTTGATGTTCTACTATAGAGGAGTATCAGAAGATGCTAAATGCTCGT GTGACAACCTTGATGAAGCGGACTGA
Upstream 100 bases:
>100_bases AGTATGATGTTGGTGGTCAAGATGGTATTCCACATACTTTCATTGTGATTACCTTGCCCGATGGGAGTGAGCGTGAGTAT GGATATGCACCCGCATGCGT
Downstream 100 bases:
>100_bases GACGAACGATCAGTAAATATCATTCACATCACCAGGCCTGCGTACACTGGCACTCTGTTGCAGCAAGTTTGCAATGACGT AGACGGCACCCACACTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTKLRALIILFVVLVVLPAFLLALFVIYLKLQGNTYYLSIKNLTNHSIYIKEVLADDRSVGLKEFTVGPTEIYLNYFHGV FKSKKVETMTFKIIDENKNAASLSCSLKVPYEGIKNCLLMFYYRGVSEDAKCSCDNLDEAD
Sequences:
>Translated_141_residues MTKLRALIILFVVLVVLPAFLLALFVIYLKLQGNTYYLSIKNLTNHSIYIKEVLADDRSVGLKEFTVGPTEIYLNYFHGV FKSKKVETMTFKIIDENKNAASLSCSLKVPYEGIKNCLLMFYYRGVSEDAKCSCDNLDEAD >Mature_140_residues TKLRALIILFVVLVVLPAFLLALFVIYLKLQGNTYYLSIKNLTNHSIYIKEVLADDRSVGLKEFTVGPTEIYLNYFHGVF KSKKVETMTFKIIDENKNAASLSCSLKVPYEGIKNCLLMFYYRGVSEDAKCSCDNLDEAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16037; Mature: 15906
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLRALIILFVVLVVLPAFLLALFVIYLKLQGNTYYLSIKNLTNHSIYIKEVLADDRSV CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCEEEHHHHHCCCCCC GLKEFTVGPTEIYLNYFHGVFKSKKVETMTFKIIDENKNAASLSCSLKVPYEGIKNCLLM CCEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHH FYYRGVSEDAKCSCDNLDEAD HHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKLRALIILFVVLVVLPAFLLALFVIYLKLQGNTYYLSIKNLTNHSIYIKEVLADDRSV CHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCEEEHHHHHCCCCCC GLKEFTVGPTEIYLNYFHGVFKSKKVETMTFKIIDENKNAASLSCSLKVPYEGIKNCLLM CCEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCHHHHHHHHHH FYYRGVSEDAKCSCDNLDEAD HHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA