Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is 182682115
Identifier: 182682115
GI number: 182682115
Start: 1770257
End: 1770784
Strand: Reverse
Name: 182682115
Synonym: XfasM23_1593
Alternate gene names: NA
Gene position: 1770784-1770257 (Counterclockwise)
Preceding gene: 182682116
Following gene: 182682114
Centisome position: 69.83
GC content: 40.15
Gene sequence:
>528_bases TTGGAGCGTGTTTTGAACATTAAACTCAAAGAATATAAAGAATATATTGCTGCGCATTCTCGTTCTGTTCTTGTGGTGTT TTTCTTCTTGCCGATGATTGTCAGTAAAATCGCGATATTGATCGGGGTGACCAATATTGGTTTTGTGTTGTCATGGGAAA CAGCGTGTCGCGCGGCATTTGGTAGTGCCGAGGGATATTCTCTGACCGTGCTCCTCTATTGGCTCATGTCACCTCTTGCG TTTTTGTGGATATTTTCGCAAGTGAATTACCAGAGTACGTCTTTTATAAAAATGATGATCATCGTTCCTTCGTGGTGGTT GATAATCATTGCTCTTGGGGTGATTGTTTTTGGTGAAGTCAAGCCTTCTTTTCTTGAATATTCAAGTTTTTCTCGGGCAA GGATTTTCTCACTTATGAGGTGGCATTGGGGTTTCTGCATGCTATATGGGGGGCTTGTTTTTTGTTTTTGTACAATGATT TATGGCGCATCATATTTAACGTTGCGTTTAATTTCTAACAGGCTTTAA
Upstream 100 bases:
>100_bases GGAGTGCCTAGATCACTCCGAAGGAATCTATTTAGTATGTTTATTGACAGAAAGACACCACGGAGTGTGTTGAGATTCTT TCATGATGAACCTTACATCT
Downstream 100 bases:
>100_bases TGAGGAGTGTTATCGTCATGAGTGACAATACGGCAGGTAAAGCCGCATCTGATCTAGTTGATTACAATAATATAAATAAT TTCAGTTCAGCCTATGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYWLMSPLA FLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMI YGASYLTLRLISNRL
Sequences:
>Translated_175_residues MERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYWLMSPLA FLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMI YGASYLTLRLISNRL >Mature_175_residues MERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAFGSAEGYSLTVLLYWLMSPLA FLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEVKPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMI YGASYLTLRLISNRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20199; Mature: 20199
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHC GSAEGYSLTVLLYWLMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMIYGASYLTLRLISNRL CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERVLNIKLKEYKEYIAAHSRSVLVVFFFLPMIVSKIAILIGVTNIGFVLSWETACRAAF CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHHHHHHC GSAEGYSLTVLLYWLMSPLAFLWIFSQVNYQSTSFIKMMIIVPSWWLIIIALGVIVFGEV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPSFLEYSSFSRARIFSLMRWHWGFCMLYGGLVFCFCTMIYGASYLTLRLISNRL CHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA