Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is trpE2 [H]
Identifier: 182682107
GI number: 182682107
Start: 1756099
End: 1757457
Strand: Reverse
Name: trpE2 [H]
Synonym: XfasM23_1585
Alternate gene names: 182682107
Gene position: 1757457-1756099 (Counterclockwise)
Preceding gene: 182682108
Following gene: 182682106
Centisome position: 69.31
GC content: 54.45
Gene sequence:
>1359_bases ATGACACTCATTCGATTTCTGCGTACGGATCCGGATTTATTGTCCATGCACCGGTTGGCACCGGAGCGTTATCCGGCGCT TTTTGAATCTACTGCTTCTGGTACTCAGCAGAGTCGTTGGGATGTGTTGTTGCATACAGATGGTCGTTTCTTCCGTTTGG ATTCCGATGGTGTAACACGCGATGCTCAGGGCAGGGCGCTGTCCGGAGACTTTTTGCAGGTATTGGATGCAGTGTGGAGC ACTGAGTACGTGCTGCGTGATACGTGTGAGGATGCTCCTCCATTCCGTGGCGGTTGGGCTTTACTTCTTGACTATGAACT GGCTGGGCAGGTTGAGCCAGTGTTGAAATTGCCAGTGCGTACTGATGGTTTGCCTATGGCGTTAGCATTGCGTTGTCCGG CAGCGGTATTACGTGACCGCCACAGTGGTGTTTTTTTGATTGTCGCTGAGCTGGGAAATGAGCATTTACTGGACGTGATT GAGGCGGATTTAGCTGCTGTTGCCTTGTTGCCGCCATTGCCGGTTTGGCGATCTCCAGTGGCCGTGACTGAGGATGAGCC GTCGCAGTTTATTGCCAATGCAGAGCGTGTGCTGGATTACCTTCGTGAGGGAGACGTGTTCCAGGCAAATATCTCACGCC TTTGGGAAGCTCGCTTTGCCACTGCACTTGATCCAGCAGCGTTGTACATGCGTTTGCGTGTAGCCAATCCTGCGCCTTTC TCGGGATTGTTTGTGGCTCATGGCCGAGCTGTGGTGAGCTCCTCACCAGAGCGGTTGATTTCGGTGCAAGGAGGGCGCAT TCAGACGCGTCCGATTGCTGGTACCCGGCCACGTTTTGTCGGTGAAGATGACGCAGCACGCATCCGCGAACTGGTGAATC ACCCTAAGGAGCGTGCTGAGCATGTGATGTTGATTGACTTAGAGCGTAACGATTTAGGGAGAGTGTGTGTGCCTGGGACC GTTGAGGTCGATGAGTTGATGACGGTGGAAAGCTATGCGCATGTCCATCATATCGTCAGTAATGTGCGTGGCTGGTTGCC TACGGGCAGGACCCCAGGGGAGATCATTCGCGCCGTGTTTCCGGGGGGGACAATCACTGGTTGTCCGAAGGTGCGTTGCA TGCAGATCATTGCCCAGCTCGAGCAGGTGGCACGCGGTGCCTACACTGGTGCCTTTGGATGGCTCAATTGTGATGGTGAT TTGGACCTGAACATTTTAATCCGCACCGCTGAGATTGACGGTGTGACTGTACGTTTCCGTAACGGTGCCGGCATCGTGAT CAATTCACTGCCTGAGCGTGAGCTGGATGAGACCCGTGCCAAGGCGACTGGCGTACTGCGCGCCCTGCATGTCATCTGA
Upstream 100 bases:
>100_bases TTTTCCGATGGCATGGCGCCTCGCTATGTTTCTATGTAGGCGGAGAGACTCAACGTGCCTTCCCTATGCTTCGCAGCTGA TCTGAATCCAGTCTAGACTA
Downstream 100 bases:
>100_bases ACGTTAGTTTTCGGTGATGCTGATACGCGCGTTATGCTGTCTGGCCTTGAAGGCTTGACGAGGTGGACTTGGTGGGACGC AAACGCGGATGTCTAGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 451
Protein sequence:
>452_residues MTLIRFLRTDPDLLSMHRLAPERYPALFESTASGTQQSRWDVLLHTDGRFFRLDSDGVTRDAQGRALSGDFLQVLDAVWS TEYVLRDTCEDAPPFRGGWALLLDYELAGQVEPVLKLPVRTDGLPMALALRCPAAVLRDRHSGVFLIVAELGNEHLLDVI EADLAAVALLPPLPVWRSPVAVTEDEPSQFIANAERVLDYLREGDVFQANISRLWEARFATALDPAALYMRLRVANPAPF SGLFVAHGRAVVSSSPERLISVQGGRIQTRPIAGTRPRFVGEDDAARIRELVNHPKERAEHVMLIDLERNDLGRVCVPGT VEVDELMTVESYAHVHHIVSNVRGWLPTGRTPGEIIRAVFPGGTITGCPKVRCMQIIAQLEQVARGAYTGAFGWLNCDGD LDLNILIRTAEIDGVTVRFRNGAGIVINSLPERELDETRAKATGVLRALHVI
Sequences:
>Translated_452_residues MTLIRFLRTDPDLLSMHRLAPERYPALFESTASGTQQSRWDVLLHTDGRFFRLDSDGVTRDAQGRALSGDFLQVLDAVWS TEYVLRDTCEDAPPFRGGWALLLDYELAGQVEPVLKLPVRTDGLPMALALRCPAAVLRDRHSGVFLIVAELGNEHLLDVI EADLAAVALLPPLPVWRSPVAVTEDEPSQFIANAERVLDYLREGDVFQANISRLWEARFATALDPAALYMRLRVANPAPF SGLFVAHGRAVVSSSPERLISVQGGRIQTRPIAGTRPRFVGEDDAARIRELVNHPKERAEHVMLIDLERNDLGRVCVPGT VEVDELMTVESYAHVHHIVSNVRGWLPTGRTPGEIIRAVFPGGTITGCPKVRCMQIIAQLEQVARGAYTGAFGWLNCDGD LDLNILIRTAEIDGVTVRFRNGAGIVINSLPERELDETRAKATGVLRALHVI >Mature_451_residues TLIRFLRTDPDLLSMHRLAPERYPALFESTASGTQQSRWDVLLHTDGRFFRLDSDGVTRDAQGRALSGDFLQVLDAVWST EYVLRDTCEDAPPFRGGWALLLDYELAGQVEPVLKLPVRTDGLPMALALRCPAAVLRDRHSGVFLIVAELGNEHLLDVIE ADLAAVALLPPLPVWRSPVAVTEDEPSQFIANAERVLDYLREGDVFQANISRLWEARFATALDPAALYMRLRVANPAPFS GLFVAHGRAVVSSSPERLISVQGGRIQTRPIAGTRPRFVGEDDAARIRELVNHPKERAEHVMLIDLERNDLGRVCVPGTV EVDELMTVESYAHVHHIVSNVRGWLPTGRTPGEIIRAVFPGGTITGCPKVRCMQIIAQLEQVARGAYTGAFGWLNCDGDL DLNILIRTAEIDGVTVRFRNGAGIVINSLPERELDETRAKATGVLRALHVI
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=459, Percent_Identity=32.244008714597, Blast_Score=201, Evalue=1e-52, Organism=Escherichia coli, GI1787518, Length=291, Percent_Identity=38.4879725085911, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI1786809, Length=246, Percent_Identity=27.6422764227642, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082077, Length=299, Percent_Identity=24.0802675585284, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320935, Length=439, Percent_Identity=30.751708428246, Blast_Score=168, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6324361, Length=281, Percent_Identity=27.7580071174377, Blast_Score=102, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR010118 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 49916; Mature: 49785
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIRFLRTDPDLLSMHRLAPERYPALFESTASGTQQSRWDVLLHTDGRFFRLDSDGVTR CCEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCC DAQGRALSGDFLQVLDAVWSTEYVLRDTCEDAPPFRGGWALLLDYELAGQVEPVLKLPVR CCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCC TDGLPMALALRCPAAVLRDRHSGVFLIVAELGNEHLLDVIEADLAAVALLPPLPVWRSPV CCCCCEEEEHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCE AVTEDEPSQFIANAERVLDYLREGDVFQANISRLWEARFATALDPAALYMRLRVANPAPF EECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCC SGLFVAHGRAVVSSSPERLISVQGGRIQTRPIAGTRPRFVGEDDAARIRELVNHPKERAE CCEEEECCCEEECCCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHCC HVMLIDLERNDLGRVCVPGTVEVDELMTVESYAHVHHIVSNVRGWLPTGRTPGEIIRAVF EEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC PGGTITGCPKVRCMQIIAQLEQVARGAYTGAFGWLNCDGDLDLNILIRTAEIDGVTVRFR CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCEEEEEE NGAGIVINSLPERELDETRAKATGVLRALHVI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLIRFLRTDPDLLSMHRLAPERYPALFESTASGTQQSRWDVLLHTDGRFFRLDSDGVTR CEEEECCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEECCCCCCC DAQGRALSGDFLQVLDAVWSTEYVLRDTCEDAPPFRGGWALLLDYELAGQVEPVLKLPVR CCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCC TDGLPMALALRCPAAVLRDRHSGVFLIVAELGNEHLLDVIEADLAAVALLPPLPVWRSPV CCCCCEEEEHHCCHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCE AVTEDEPSQFIANAERVLDYLREGDVFQANISRLWEARFATALDPAALYMRLRVANPAPF EECCCCHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCHHHEEEEEEECCCCCC SGLFVAHGRAVVSSSPERLISVQGGRIQTRPIAGTRPRFVGEDDAARIRELVNHPKERAE CCEEEECCCEEECCCCCCEEEECCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHCC HVMLIDLERNDLGRVCVPGTVEVDELMTVESYAHVHHIVSNVRGWLPTGRTPGEIIRAVF EEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHC PGGTITGCPKVRCMQIIAQLEQVARGAYTGAFGWLNCDGDLDLNILIRTAEIDGVTVRFR CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEEEECCCEEEEEE NGAGIVINSLPERELDETRAKATGVLRALHVI CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]